Gwyddion – Free SPM (AFM, SNOM/NSOM, STM, MFM, …) data analysis software

Module List

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NameVersionAuthors
accurexii-txt1.1Yeti
acf2d3.0Yeti
afmw-spec1.1Yeti
aistfile0.5.3Yeti
alicona0.4Yeti
ambfile0.3Yeti
ambprofile1.0Yeti
anasys_xml0.8Jeffrey J. Schwartz
andorsif0.1Yeti
anfatec0.6Yeti
angle_dist2.0Yeti
anneal_synth2.0Yeti
apedaxfile0.8.1Andrea Cervesato, Gianfranco Gallizia, Samo Ziberna
apefile0.13Yeti
arc-revolve2.0Yeti
ardf0.1Vojtech Klapetek
arithmetic4.0Yeti
asciiexport3.0Yeti
assing-afm0.18Yeti
attocube0.4Yeti
averaging0.2Daniil Bratashov
axis2.9Yeti
basicops2.0Yeti
bcrfile0.18Yeti
bdep_synth2.0Yeti
binning2.0Yeti
blockstep1.0Yeti
burleigh0.6Yeti
burleigh_bii0.3Jan Hořák, Yeti
burleigh_exp0.2Yeti
calcoefs_load1.1Petr Klapetek
calcoefs_new1.0Petr Klapetek
calcoefs_simple1.1Petr Klapetek
calcoefs_view1.0Petr Klapetek
calibrate4.0Petr Klapetek
classify1.1Petr Klapetek
cmap_align1.0Yeti
cmap_basicops1.0Yeti
cmap_crop1.0Yeti
cmap_cutter1.0Yeti
cmap_extractcurve1.0Yeti
cmap_fdfit1.0Petr Klapetek
cmap_fztofd1.0Petr Klapetek
cmap_linestat1.0Yeti
cmap_lockin1.0Petr Klapetek
cmap_polylevel1.0Petr Klapetek
cmap_possearch1.0Petr Klapetek
cmap_simplemech1.0Yeti, Petr Klapetek
cmap_sinebg1.0Petr Klapetek
codevfile0.3Yeti
coerce2.0Yeti
col_synth2.0Yeti
convolution_filter1.7Yeti
convolve2.0Yeti
correct_affine2.1Yeti
correct_perspective2.2Yeti
corrlen2.2Yeti
cpde_synth3.0Yeti
cprofile2.1Yeti
createc1.2Rok Zitko
crop3.2Yeti
cross1.2Yeti
crosscor2.0Petr Klapetek
csmfile0.3Yeti
curvature3.1Yeti
cwt2.0Petr Klapetek
deconvolve2.0Yeti
dektakvca0.2Yeti
dektakxml0.2Yeti
deposit_synth2.0Petr Klapetek
diff_synth2.0Yeti
dimensionfile0.1Yeti
disc_synth2.0Yeti
displfield2.0Yeti
distance3.1Nenad Ocelic
dm3file2.4Yeti
dmefile0.5.1Yeti
domain_synth3.1Yeti
drift3.0Petr Klapetek, Yeti
dumbfile1.2Yeti
dune_synth1.0Yeti
dwt2.0Petr Klapetek
dwtanisotropy2.0Petr Klapetek
ecsfile0.7Yeti
edge1.15Petr Klapetek
ellipse1.9Yeti
entropy2.0Yeti
evovisxml0.1Yeti
extend2.0Yeti
extract_path2.0Yeti
ezdfile0.9Yeti
facet-level3.0Yeti
facet_analysis3.0Yeti
facet_measure2.2Yeti
fbm_synth2.0Yeti
femtoscan1.0Yeti
femtoscan-txt0.1Yeti
fft3.0Petr Klapetek
fft_filter_1d3.0Petr Klapetek
fft_filter_2d1.12Chris Anderson
fft_synth2.0Yeti
fibre_synth2.0Yeti
filter4.0Petr Klapetek
fit-shape2.2Yeti
fitsfile1.0Yeti
flatten_base1.1Yeti
formats3d2.1Yeti
fraccor1.3Petr Klapetek
fractal3.0Jindřich Bilek & Petr Klapetek
freq_split2.0Yeti
gaussian_step2.0Yeti
gdeffile0.4Yeti
good_profile2.0Yeti
gradient1.6Petr Klapetek
grain_cross4.0Yeti
grain_dist5.0Petr Klapetek, Sven Neumann, Yeti
grain_edge0.6Daniil Bratashov
grain_filter1.2Yeti
grain_makesel1.0Yeti
grain_mark2.0Petr Klapetek
grain_stat2.0Petr Klapetek, Sven Neumann, Yeti
grain_summary2.0Petr Klapetek, Sven Neumann, Yeti
grain_wshed2.0Petr Klapetek
grainmeasure2.0Yeti
grainremover4.0Petr Klapetek, Yeti
graph_align1.3Yeti
graph_cd2.5Petr Klapetek
graph_cut2.0Petr Klapetek
graph_dos_spectrum0.2Daniil Bratashov
graph_export_ascii3.0Petr Klapetek
graph_export_bitmap2.1Petr Klapetek
graph_export_vector2.0Petr Klapetek
graph_fdfit1.6Petr Klapetek
graph_filter0.4Daniil Bratashov
graph_fit2.11Petr Klapetek
graph_flip1.0Petr Klapetek
graph_fztofd1.0Petr Klapetek
graph_invert1.0Petr Klapetek
graph_level1.5Petr Klapetek
graph_logscale2.0Yeti
graph_measure_period1.0Yeti
graph_merge1.0Yeti
graph_peaks2.0Yeti
graph_polylevel1.1Petr Klapetek
graph_sfuncs2.0Yeti
graph_simplemech1.0Petr Klapetek
graph_sinebg1.1Petr Klapetek
graph_stats3.1Yeti
graph_terraces2.1Yeti
gsffile1.3Yeti
gwyfile0.18Yeti
gxyzffile2.1Yeti
hdf4file0.8Yeti
hdf5file1.3Yeti
hdrimage3.4Yeti
hertz0.2Anna Charvatova Campbell
hitachi-afm0.7Yeti
hitachi-sem0.2Yeti
hough2.0Petr Klapetek
icolorange4.2Yeti
igorfile0.13Yeti
imgexport3.1Yeti
immerse3.0Petr Klapetek
indent_analyze1.0Lukáš Chvátal & Yeti
intelliwave0.1Yeti
intematix0.4Yeti
iso286000.4Yeti
jeol0.8Yeti
jeoltem0.1Yeti
jpkscan0.16Sven Neumann, Yeti
jspmfile0.2Yeti
keyence2.3Yeti
laplace2.1Petr Klapetek
lat_synth2.0Yeti
latsim2.0Petr Klapetek
lattice1.2Yeti
leica0.5Daniil Bratashov
level3.1Yeti
level33.0Yeti
level_grains2.0David Nečas
lextfile0.6Yeti
line3.8Yeti
linecorrect1.12Yeti, Luke Somers
linematch2.0Yeti
linestats3.1Yeti
lno_synth2.1Yeti
local_contrast2.0Yeti
logistic0.5Daniil Bratashov
magellan1.2Yeti
mapvue0.4Yeti
mark_disconn2.0Yeti
mark_with2.0Yeti
mask_distribute2.0Yeti
mask_edt3.0Yeti
mask_morph2.0Yeti
mask_noisify2.0Yeti
mask_shift2.0Yeti
maskcor3.1Petr Klapetek, Yeti
maskedit4.2Yeti
maskops1.7Yeti
matfile0.2Yeti
mcrop0.5Daniil Bratashov
measure_lattice3.5Yeti
median-bg2.0Yeti
merge4.0Petr Klapetek, Yeti
metropro1.3Yeti
mfm_current2.0Petr Klapetek
mfm_field2.0Petr Klapetek
mfm_findshift1.3Petr Klapetek
mfm_parallel2.0Petr Klapetek
mfm_recalc2.0Petr Klapetek, Robb Puttock
mfm_shift2.1Petr Klapetek
microprof1.1Yeti
miffile0.3Yeti
mifile0.18Chris Anderson
mulfile0.2Yeti
multiprofile1.1Yeti
nanoeducator0.6Yeti
nanomagnetics1.2Sameer Grover
nanonics0.5Yeti
nanonis1.4Yeti
nanonis-spec1.3Yeti
nanoobserver2.3Yeti
nanoscan0.9Yeti
nanoscantech0.16Daniil Bratashov (dn2010@gmail.com)
nanoscope0.49Yeti
nanoscope-ii0.3Yeti
nanosystemz0.1Yeti
nanotop1.9Alexander Kovalev
netcdf0.10Yeti
neural2.4Petr Klapetek
nmmxyz2.1Yeti
noise_synth2.0Yeti
nova-asc0.1Yeti
npyfile1.0Yeti
nrrdfile0.9Yeti
nt-mdt0.25Yeti
nxiifile1.0Yeti
obj_synth2.1Yeti
oirfile0.8Yeti
oldmda0.4dn2010
ols0.11Jan Hořák, Yeti
ometiff1.1Yeti
omicron0.14Yeti
omicronflat2.5Yeti
omicronmatrix0.90Philipp Rahe
opdfile0.12Yeti
opengps1.4Yeti
otsu_threshold1.2Vinicius Barboza
outliers1.5Petr Klapetek
pat_synth3.1Yeti
path1.2Yeti
pathlevel2.0Yeti
phase_synth2.0Yeti
phoenix1.0Yeti
pid2.0Petr Klapetek
pileup_synth2.0Yeti
pixmap10.2Yeti
plateau_synth1.0Yeti
pltfile0.2Yeti
pnifile0.8Yeti
point3.5Yeti
polydistort1.5Yeti
polylevel4.1Yeti
presentationops2.0Yeti
princetonspe0.1Yeti
profile5.1Petr Klapetek
projective1.1Yeti
psdf2d2.1Yeti
psdf_logphi2.0Yeti
psf4.1Petr Klapetek, Yeti
psf-fit3.0Yeti
psia0.9Yeti
psppt1.1Yeti
pt3file0.2Yeti
pygwy2.6Jan Hořák, Yeti
quazarnpic0.2Yeti
quesant0.6Jan Hořák, Yeti
rank3.0Yeti
rank_filter2.0Yeti
raveraging2.0Petr Klapetek
rawfile3.0Yeti
rawgraph0.8Yeti
readvalue4.2Yeti
rectangle2.12Yeti
relate2.0Yeti
renishaw0.12Daniil Bratashov
resample2.1Yeti
rhk-sm30.16Yeti
rhk-sm40.8Yeti
rhk-spm320.12Yeti
robotics0.2Mira
roddeposit_synth1.0Petr Klapetek
rotate3.1Yeti
roughness3.1Martin Hasoň, Yeti
rprofile2.1Yeti
s94file1.1Yeti
scale2.1Yeti
scars2.0Yeti
sdfile0.14Yeti
seiko0.13Yeti
selectionmanager3.0Yeti
semsim2.0Yeti
sensofar1.0Jan Hořák, Yeti
sensofarx1.1Yeti
sensolytics0.5Yeti
sfunctions3.3Petr Klapetek
shade3.0Petr Klapetek
shimadzu0.6Yeti
sicmfile1.3Matthew Caldwell
sis0.17Yeti
slope_dist3.0Yeti
spcfile0.3Daniil Bratashov
spectro0.20Owain Davies
sphere-revolve3.0Yeti
spip-asc0.8Yeti
spml0.2Jan Hořák
spmlab0.12Yeti
spmlabf0.6Yeti
spmxfile1.4Yeti
spotremove4.2Yeti
stats4.3Petr Klapetek
stitch1.2Petr Grolich
stmprg0.12Rok Zitko, Yeti
stpfile0.5.3Yeti
straighten_path2.1Yeti
surffile0.12Petr Klapetek
terracefit2.0Yeti
tescan2.0Yeti
threshold2.0Yeti
tiaser0.5dn2010
tilt2.0Yeti
tip_blind2.1Petr Klapetek
tip_model3.0Petr Klapetek
tipops2.0Petr Klapetek, Yeti
tipshape2.1Anna Charvatova Campbell
trimmed-mean2.0Yeti
ttffile1.0Yeti, Thomas Wagner
unisoku0.10Yeti
volume_1dfft1.0Petr Klapetek
volume_addframe1.0Petr Klapetek
volume_arithmetic2.1Yeti
volume_asciiexport2.0Yeti
volume_calibrate2.0Petr Klapetek
volume_crop1.0Petr Klapetek
volume_drift1.0Petr Klapetek
volume_equiplane2.0Petr Klapetek
volume_extract2.1Petr Klapetek
volume_facetlevel1.0Petr Klapetek
volume_fdfit1.2Petr Klapetek
volume_flattenbase1.0Petr Klapetek
volume_invert1.1Petr Klapetek
volume_kmeans2.0Daniil Bratashov & Evgeniy Ryabov
volume_kmedians2.0Daniil Bratashov & Evgeniy Ryabov
volume_lawnize1.0Yeti
volume_linelevel1.0Petr Klapetek
volume_linestat2.0Yeti
volume_localdetect1.0Petr Klapetek
volume_meanplanelevel1.0Petr Klapetek
volume_mfmrecalc2.0Petr Klapetek, Robb Puttock
volume_outliers1.1Petr Klapetek
volume_planelevel1.1Petr Klapetek
volume_planestat2.1Yeti
volume_psf3.0Petr Klapetek
volume_removeframe1.0Petr Klapetek
volume_rephase2.1Petr Klapetek
volume_scars1.0Petr Klapetek
volume_slice3.1Yeti
volume_stepline1.0Yeti, Luke Somers, Petr Klapetek
volume_strayfield2.0Petr Klapetek
volume_swaxes2.0Yeti
volume_xyarithmetics1.1Petr Klapetek,
volume_xystitch1.0Petr Klapetek
volume_zcal2.0Yeti
volume_zposlevel2.0Petr Klapetek
volumeops1.1Yeti
volumize1.2Petr Klapetek
volumize_layers3.0Petr Klapetek
wave_synth2.0Yeti
wfr_synth1.0Yeti
win_stm0.6Jeffrey J. Schwartz
wipfile0.11Daniil Bratashov
witec-asc0.3Yeti
witfile0.7Yeti
wpour_mark2.0Yeti
wrapvalue2.0Yeti
wrustfile1.3Yeti
wsffile0.6Yeti
wsxmfile0.22Yeti
xydenoise2.0Petr Klapetek
xyz_autocrop1.0Petr Klapetek
xyz_channels2.0Petr Klapetek
xyz_crop1.0Petr Klapetek
xyz_level2.0Yeti
xyz_raster2.0Yeti
xyz_split2.0Petr Klapetek
xyz_tcut1.0Petr Klapetek
xyz_zdrift1.0Petr Klapetek
xyzexport3.1Yeti
xyzize1.2Yeti
xyzops1.0Yeti
zeiss0.6Yeti
zeisslsm0.4Daniil Bratashov
zemax1.1Yeti
zero_crossing1.0Yeti
zonfile1.0Yeti

accurexii-txt

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Imports Accurex II text files. (User guide)

Functions
TypeNameInformation
fileaccurexii-txtAccurex II text files (.txt)

acf2d

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2007

Description: Calculates and analyzes two-dimensional autocorrelation function. (User guide)

Functions
TypeNameInformation
procacf2dStatistics → 2D Autocorrelation

afmw-spec

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Imports AFM Workshop spectrum files. (User guide)

Functions
TypeNameInformation
fileafmw_specAFM Workshop spectrum files (.csv)

aistfile

Version: 0.5.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports AIST-NT data files. (User guide)

Functions
TypeNameInformation
fileaistfileAIST-NT files (.aist)

alicona

Version: 0.4
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports Alicona Imaging AL3D files. (User guide)

Functions
TypeNameInformation
filealiconaAlicona Imaging AL3D files (.al3d)

ambfile

Version: 0.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports Ambios AMB data files. (User guide)

Functions
TypeNameInformation
fileambfileAmbios amb files (.amb)

ambprofile

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Imports Ambios 1D profilometry data files. (User guide)

Functions
TypeNameInformation
fileambprofxmlAmbios 1D profilometry data files (.xml)
fileambprofdatAmbios 1D profilometry data files (.dat)

anasys_xml

Version: 0.8
Authors: Jeffrey J. Schwartz
Copyright: Jeffrey J. Schwartz September 2018

Description: Imports Analysis Studio XML (.axz & .axd) files. (User guide)

Functions
TypeNameInformation
fileanasys_xmlAnalysis Studio XML (.axz, .axd)

andorsif

Version: 0.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2023

Description: Imports Andor SIF data files. (User guide)

Functions
TypeNameInformation
fileandorsifAndor SIF files (.sif)

anfatec

Version: 0.6
Authors: Yeti
Copyright: David Nečas (Yeti) 2010

Description: Imports Anfatec data files (two-part .txt + .int). (User guide)

Functions
TypeNameInformation
fileanfatecAnfatec files (.par + .int)

angle_dist

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Calculates two-dimensional distribution of angles, that is projections of slopes to all directions. (User guide)

Functions
TypeNameInformation
procangle_distStatistics → Angle Distribution

anneal_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Generates images by annealing a lattice gas model. (User guide)

Functions
TypeNameInformation
procanneal_synthSynthetic → Order and Disorder → Anneal

apedaxfile

Version: 0.8.1
Authors: Andrea Cervesato, Gianfranco Gallizia, Samo Ziberna
Copyright: A.P.E. Research srl 2015

Description: Imports A.P.E. Research DAX data files. (User guide)

Functions
TypeNameInformation
fileapedaxfileA.P.E. Research DAX Files (.dax) and APDT File (.apdt)

apefile

Version: 0.13
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports APE (Applied Physics and Engineering) data files. (User guide)

Functions
TypeNameInformation
fileapefileAPE files (.dat)

arc-revolve

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts background by arc revolution. (User guide)

Functions
TypeNameInformation
procarc_revolveLevel → Revolve Arc

ardf

Version: 0.1
Authors: Vojtech Klapetek
Copyright: Vojtech Klapetek, Matt Poss 2023

Description: Imports Asylum Research ARDF files. (User guide)

Functions
TypeNameInformation
fileardfARDF file (.ARDF)

arithmetic

Version: 4.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2004

Description: Simple arithmetic operations with data fields. (User guide)

Functions
TypeNameInformation
procarithmeticMultidata → Arithmetic

asciiexport

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2004

Description: Exports data as simple ASCII matrix and reads back this format. (User guide)

Functions
TypeNameInformation
fileasciiexportASCII data matrix (.txt)

assing-afm

Version: 0.18
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Assing AFM data files. (User guide)

Functions
TypeNameInformation
fileassing-afmAssing AFM files (.afm)

attocube

Version: 0.4
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports Attocube Systems ASC files. (User guide)

Functions
TypeNameInformation
fileattocubeAttocube ASCII files (.asc)

averaging

Version: 0.2
Authors: Daniil Bratashov
Copyright: David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2011

Description: Similar structures averaging using autocorrelation

Functions
TypeNameInformation
procaveragingCorrect Data → Correlation Averaging

axis

Version: 2.9
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of horizontal or vertical lines. (User guide)

Functions
TypeNameInformation
layerGwyLayerAxis

basicops

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Basic operations like flipping, value inversion, and rotation by multiples of 90 degrees. (User guide)

Functions
TypeNameInformation
procinvert_valueBasic Operations → Invert Value
procflip_horizontallyBasic Operations → Flip Horizontally
procflip_verticallyBasic Operations → Flip Vertically
procflip_diagonallyBasic Operations → Flip Diagonally
procrotate_180Basic Operations → Flip Both
procrotate_90_cwBasic Operations → Rotate Clockwise
procrotate_90_ccwBasic Operations → Rotate Counterclockwise
procsquare_samplesBasic Operations → Square Samples
procnull_offsetsBasic Operations → Null Offsets

bcrfile

Version: 0.18
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Image Metrology BCR data files. (User guide)

Functions
TypeNameInformation
filebcrfileBCR files (.bcr, .bcrf)

bdep_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Generates surfaces by ballistic deposition. (User guide)

Functions
TypeNameInformation
procbdep_synthSynthetic → Deposition → Ballistic

binning

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2017

Description: Creates a smaller image using binning. (User guide)

Functions
TypeNameInformation
procbinningBasic Operations → Binning

blockstep

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2023

Description: Corrects vertical steps in scan lines by block. (User guide)

Functions
TypeNameInformation
procblock_correct_stepCorrect Data → Step Block Correction

burleigh

Version: 0.6
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek & Hans-Peter Doerr 2006

Description: Imports Burleigh IMG data files version 2.1. (User guide)

Functions
TypeNameInformation
fileburleighBurleigh 2.1 files (.img)

burleigh_bii

Version: 0.3
Authors: Jan Hořák, Yeti
Copyright: Jan Hořák & David Nečas (Yeti) & Petr Klapetek 2008

Description: Imports Burleigh BII binary data files. (User guide)

Functions
TypeNameInformation
fileburleigh_biiBurleigh Image Studio files (.bii)

burleigh_exp

Version: 0.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2007

Description: Imports Burleigh text/bin exported images. (User guide)

Functions
TypeNameInformation
fileburleigh_expBurleigh exported data (.txt, .bin)

calcoefs_load

Version: 1.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2010

Description: Load calibration data from text file (User guide)

Functions
TypeNameInformation
proccloadCalibration → Load From Text File

calcoefs_new

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2010

Description: Create simple calibration data (User guide)

Functions
TypeNameInformation
proccnewCalibration → Create

calcoefs_simple

Version: 1.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2010

Description: Simple error map based on grating measurements (User guide)

Functions
TypeNameInformation
procsimpleCalibration → Get Simple Errop Map

calcoefs_view

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2010

Description: 3D calibration/uncertainty (User guide)

Functions
TypeNameInformation
proccc_viewCalibration → Apply to Data

calibrate

Version: 4.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Recalibrates scan lateral dimensions or value range. (User guide)

Functions
TypeNameInformation
proccalibrateBasic Operations → Dimensions and Units
xyzxyz_calibrate
cmapcmap_calibrate

classify

Version: 1.1
Authors: Petr Klapetek
Copyright: Petr Klapetek 2020

Description: Classify data sets using multiple data fields.

Functions
TypeNameInformation
procclassifyMultidata → Classify

cmap_align

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Aligns curves in a curve map by shifting the values. (User guide)

Functions
TypeNameInformation
cmapcmap_align

cmap_basicops

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Basic operations like flipping and rotation by multiples of 90 degrees. (User guide)

Functions
TypeNameInformation
cmapcmap_flip_horizontally
cmapcmap_flip_vertically
cmapcmap_rotate_180
cmapcmap_rotate_90_cw
cmapcmap_rotate_90_ccw
cmapcmap_null_offsets
cmapcmap_remove_segments

cmap_crop

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Crop curve map data. (User guide)

Functions
TypeNameInformation
cmapcmap_crop

cmap_cutter

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Cuts a curve map to segments. (User guide)

Functions
TypeNameInformation
cmapcmap_cutter

cmap_extractcurve

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Extracts individual curves from a curve map. (User guide)

Functions
TypeNameInformation
cmapcmap_extractcurve

cmap_fdfit

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Fit FD curves.

Functions
TypeNameInformation
cmapcmap_fdfit

cmap_fztofd

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Converts FZ to FD curve map. (User guide)

Functions
TypeNameInformation
cmapcmap_fztofd

cmap_linestat

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Summarizes curves in curve map data to an image.

Functions
TypeNameInformation
cmapcmap_linestat

cmap_lockin

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2022

Description: Detect oscillations in a curve.

Functions
TypeNameInformation
cmapcmap_lockin

cmap_polylevel

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Removes polynomial background from curves. (User guide)

Functions
TypeNameInformation
cmapcmap_polylevel

cmap_possearch

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2022

Description: Picks a quantity at some threshold position.

Functions
TypeNameInformation
cmapcmap_possearch

cmap_simplemech

Version: 1.0
Authors: Yeti, Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Get simple mechanical quantities (User guide)

Functions
TypeNameInformation
cmapcmap_simplemech

cmap_sinebg

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Remove sine background from curves. (User guide)

Functions
TypeNameInformation
cmapcmap_sinebg

codevfile

Version: 0.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports Code V interferogram files. (User guide)

Functions
TypeNameInformation
filecodevfileCode V interferogram files (.int)

coerce

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Transforms surfaces to have prescribed statistical properties. (User guide)

Functions
TypeNameInformation
proccoerceDistortion → Coerce

col_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Generates columnar surfaces by a simple growth algorithm. (User guide)

Functions
TypeNameInformation
proccol_synthSynthetic → Deposition → Columnar

convolution_filter

Version: 1.7
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Generic convolution filter with a user-defined matrix. (User guide)

Functions
TypeNameInformation
procconvolution_filterIntegral Transforms → Convolution Filter

convolve

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Convolves two images. (User guide)

Functions
TypeNameInformation
procconvolveMultidata → Convolve

correct_affine

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2013

Description: Corrects affine distortion of images by matching image Bravais lattice to the true one. (User guide)

Functions
TypeNameInformation
proccorrect_affineDistortion → Affine

correct_perspective

Version: 2.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Corrects or applies perspective distortion of images. (User guide)

Functions
TypeNameInformation
proccorrect_perspectiveDistortion → Perspective

corrlen

Version: 2.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2020

Description: Correlation length tool. (User guide)

Functions
TypeNameInformation
toolGwyToolCorrLenCorrelation Length

cpde_synth

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Generates images by assorted coupled partial differential equation models. (User guide)

Functions
TypeNameInformation
proccpde_synthSynthetic → Order and Disorder → Coupled PDEs

cprofile

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Profile tool which reads horizontal and/or vertical scan lines. (User guide)

Functions
TypeNameInformation
toolGwyToolCprofileRead horizontal and/or vertical profiles

createc

Version: 1.2
Authors: Rok Zitko
Copyright: Rok Zitko, David Nečas (Yeti) 2004

Description: Imports Createc data files. (User guide)

Functions
TypeNameInformation
filecreatecCreatec files (.dat)

crop

Version: 3.2
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Crop tool, crops data to smaller size. (User guide)

Functions
TypeNameInformation
toolGwyToolCropCrop data

cross

Version: 1.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Layer allowing selection of combined horizontal and vertical lines. (User guide)

Functions
TypeNameInformation
layerGwyLayerCross

crosscor

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Calculates cross-correlation of two data fields. (User guide)

Functions
TypeNameInformation
proccrosscorMultidata → Cross-Correlation

csmfile

Version: 0.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports Benyuan CSM data files. (User guide)

Functions
TypeNameInformation
filecsmfileBenyuan CSM files (.csm)

curvature

Version: 3.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Calculates overall curvature. (User guide)

Functions
TypeNameInformation
proccurvatureMeasure Features → Curvature

cwt

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Two-dimensional CWT (Continuous Wavelet Transform). (User guide)

Functions
TypeNameInformation
proccwtIntegral Transforms → 2D CWT

deconvolve

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Regularized image deconvolution. (User guide)

Functions
TypeNameInformation
procdeconvolveMultidata → Deconvolve

dektakvca

Version: 0.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2017

Description: Imports Dektak OPDx data files. (User guide)

Functions
TypeNameInformation
filedektakvcaDektak OPDx data files (.OPDx)

dektakxml

Version: 0.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Imports Dektak XML data files. (User guide)

Functions
TypeNameInformation
filedektakxmlDektak XML data files (.xml)

deposit_synth

Version: 2.0
Authors: Petr Klapetek
Copyright: Petr Klapetek 2010

Description: Generates particles using simple dynamical model (User guide)

Functions
TypeNameInformation
procdeposit_synthSynthetic → Deposition → Particles

diff_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Generates surfaces by diffusion limited aggregation. (User guide)

Functions
TypeNameInformation
procdiff_synthSynthetic → Deposition → Diffusion

dimensionfile

Version: 0.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Imports old Veeco Dimension 3100D files. (User guide)

Functions
TypeNameInformation
filedimensionfileDimension 3100D files (.001, .002, ...)

disc_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Generates random more or less touching discs. (User guide)

Functions
TypeNameInformation
procdisc_synthSynthetic → Discs

displfield

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Distorts image or individual scan lines in plane using a displacement field. (User guide)

Functions
TypeNameInformation
procdisplfieldDistortion → Displacement Field

distance

Version: 3.1
Authors: Nenad Ocelic
Copyright: Nenad Ocelic & David Nečas (Yeti) & Petr Klapetek 2004

Description: Distance measurement tool, measures distances and angles. (User guide)

Functions
TypeNameInformation
toolGwyToolDistanceMeasure distances and directions between points

dm3file

Version: 2.4
Authors: Yeti
Copyright: David Nečas (Yeti) 2012

Description: Reads Digital Micrograph DM3 and DM4 files. (User guide)

Functions
TypeNameInformation
filedm3fileDigital Micrograph DM3 TEM data (.dm3)
filedm4fileDigital Micrograph DM4 TEM data (.dm4)

dmefile

Version: 0.5.1
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Danish Micro Engineering (DME) data files. (User guide)

Functions
TypeNameInformation
filedmefileDME files (.img)

domain_synth

Version: 3.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Generates domain images using a hybrid Ising model. (User guide)

Functions
TypeNameInformation
procdomain_synthSynthetic → Order and Disorder → Domains

drift

Version: 3.0
Authors: Petr Klapetek, Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2007

Description: Evaluates and/or correct thermal drift in fast scan axis. (User guide)

Functions
TypeNameInformation
procdriftDistortion → Compensate Drift

dumbfile

Version: 1.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Reads and exports Gwyddion dumb dump files. (User guide)

Functions
TypeNameInformation
filedumbfileGwyddion dumb dump files (.dump)

dune_synth

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2022

Description: Generates images by simulating formation of sand dunes. (User guide)

Functions
TypeNameInformation
procdune_synthSynthetic → Deposition → Dunes

dwt

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Two-dimensional DWT (Discrete Wavelet Transform). (User guide)

Functions
TypeNameInformation
procdwtIntegral Transforms → 2D DWT

dwtanisotropy

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: 2D DWT anisotropy detection based on X/Y components ratio. (User guide)

Functions
TypeNameInformation
procdwtanisotropyIntegral Transforms → DWT Anisotropy

ecsfile

Version: 0.7
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek & Markus Pristovsek 2006

Description: Imports ECS IMG files. (User guide)

Functions
TypeNameInformation
fileecsfileECS files (.img)

edge

Version: 1.15
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Several edge detection methods (Laplacian of Gaussian, Canny, and some experimental), creates presentation. (User guide)

Functions
TypeNameInformation
procedge_laplacianPresentation → Edge Detection → Laplacian of Gaussian
procedge_cannyPresentation → Edge Detection → Canny
procedge_rmsPresentation → Edge Detection → RMS
procedge_rms_edgePresentation → Edge Detection → RMS Edge
procedge_nonlinearityPresentation → Edge Detection → Local Nonlinearity
procedge_hough_linesPresentation → Edge Detection → Hough Lines
procedge_harrisPresentation → Edge Detection → Harris Corner
procedge_inclinationPresentation → Edge Detection → Inclination
procedge_stepPresentation → Edge Detection → Step
procedge_sobelPresentation → Edge Detection → Sobel
procedge_prewittPresentation → Edge Detection → Prewitt
procslope_mapIntegral Transforms → Local Slope

ellipse

Version: 1.9
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Layer allowing selection of elliptic areas. (User guide)

Functions
TypeNameInformation
layerGwyLayerEllipse

entropy

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Visualizes entropy calculation for value and slope distribution. (User guide)

Functions
TypeNameInformation
procentropyStatistics → Entropy

evovisxml

Version: 0.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2020

Description: Imports Evovis XML data files. (User guide)

Functions
TypeNameInformation
fileevovisxmlEvovis XML data files (.xml)

extend

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2012

Description: Extends image by adding borders. (User guide)

Functions
TypeNameInformation
procextendBasic Operations → Extend

extract_path

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Extracts coordinates and tangents along a path selection. (User guide)

Functions
TypeNameInformation
procextract_pathDistortion → Extract Path Selection

ezdfile

Version: 0.9
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Nanosurf EZD and NID data files. (User guide)

Functions
TypeNameInformation
fileezdfileNanosurf files (.ezd, .nid)

facet-level

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Automatic facet-orientation based leveling. Levels data to make facets point up. (User guide)

Functions
TypeNameInformation
procfacet-levelLevel → Facet Level

facet_analysis

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Visualizes, marks and measures facet orientation. (User guide)

Functions
TypeNameInformation
procfacet_analysisMeasure Features → Facet Analysis

facet_measure

Version: 2.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Visualizes, marks and measures facet orientation. (User guide)

Functions
TypeNameInformation
procfacet_measureMeasure Features → Facet Measurement

fbm_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Generates random surfaces similar to fractional Brownian motion. (User guide)

Functions
TypeNameInformation
procfbm_synthSynthetic → Noise → Brownian

femtoscan

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Imports FemtoScan SPM data files. (User guide)

Functions
TypeNameInformation
filefemtoscanFemtoScan SPM files

femtoscan-txt

Version: 0.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Imports FemtoScan TXT files. (User guide)

Functions
TypeNameInformation
filefemtoscan-txtFemtoScan text files (.txt)

fft

Version: 3.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Two-dimensional FFT (Fast Fourier Transform). (User guide)

Functions
TypeNameInformation
procfftIntegral Transforms → 2D FFT

fft_filter_1d

Version: 3.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: FFT filtering (User guide)

Functions
TypeNameInformation
procfft_filter_1dCorrect Data → 1D FFT Filtering

fft_filter_2d

Version: 1.12
Authors: Chris Anderson
Copyright: Chris Anderson, Molecular Imaging Corp. 2005

Description: 2D FFT Filtering (User guide)

Functions
TypeNameInformation
procfft_filter_2dCorrect Data → 2D FFT Filtering

fft_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Generates random surfaces using spectral synthesis. (User guide)

Functions
TypeNameInformation
procfft_synthSynthetic → Noise → Spectral

fibre_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2017

Description: Generates surfaces composed from randomly placed fibers. (User guide)

Functions
TypeNameInformation
procfibre_synthSynthetic → Deposition → Fibers

filter

Version: 4.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Filter tool, processes selected part of data with a filter (conservative denoise, mean, median, Kuwahara, minimum, maximum). (User guide)

Functions
TypeNameInformation
toolGwyToolFilterBasic filters: mean, median, denoise, …

fit-shape

Version: 2.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Fits predefined geometrical shapes to data. (User guide)

Functions
TypeNameInformation
procfit_shapeMeasure Features → Fit Shape
xyzxyz_fit_shape

fitsfile

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Reads Flexible Image Transport System (FITS) files. (User guide)

Functions
TypeNameInformation
filefitsfileFlexible Image Transport System FITS (.fits)

flatten_base

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Levels the flat base of a surface with positive features. (User guide)

Functions
TypeNameInformation
procflatten_baseLevel → Flatten Base

formats3d

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2020

Description: Exports images as miscellaneous 3D data formats and imports XYZ points from 3D formats. (User guide)

Functions
TypeNameInformation
filevtk3dVTK structured grid (.vtk)
fileply3dPolygon file format (.ply)
fileobj3dWavefront geometry definition (.obj)
fileoff3dObject File Format (.off)
filestl3dStereolitography STL (.stl)
filerawxyzXYZ data files (.xyz)

fraccor

Version: 1.3
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Removes data under mask using fractal interpolation. (User guide)

Functions
TypeNameInformation
procfraccorCorrect Data → Fractal Correction

fractal

Version: 3.0
Authors: Jindřich Bilek & Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek & Jindřich Bílek 2004

Description: Calculates fractal dimension using several methods (partitioning, box counting, triangulation, power spectrum). (User guide)

Functions
TypeNameInformation
procfractalStatistics → Fractal Dimension

freq_split

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Splits image into low and high frequency components. (User guide)

Functions
TypeNameInformation
procfreq_splitLevel → Frequency Split

gaussian_step

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2019

Description: Edge detection using a Gaussian step filter. (User guide)

Functions
TypeNameInformation
procgaussian_stepPresentation → Edge Detection → Gaussian Step

gdeffile

Version: 0.4
Authors: Yeti
Copyright: David Nečas (Yeti) 2010

Description: Imports DME GDEF data files. (User guide)

Functions
TypeNameInformation
filegdeffileDME GDEF files (.gdf)

good_profile

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2020

Description: Calculates good average row from one or multiple images of repeated scanning of the same feature. (User guide)

Functions
TypeNameInformation
procgood_profileCorrect Data → Good Mean Profile

gradient

Version: 1.6
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Creates presentations with various gradients (Sobel, Prewitt). (User guide)

Functions
TypeNameInformation
procsobel_horizontalPresentation → Gradient → Sobel (horizontal)
procsobel_verticalPresentation → Gradient → Sobel (vertical)
procprewitt_horizontalPresentation → Gradient → Prewitt (horizontal)
procprewitt_verticalPresentation → Gradient → Prewitt (vertical)
procazimuthPresentation → Gradient → Azimuth

grain_cross

Version: 4.0
Authors: Yeti
Copyright: David Nečas 2007

Description: Plots one grain quantity as a function of another. (User guide)

Functions
TypeNameInformation
procgrain_crossGrains → Correlate

grain_dist

Version: 5.0
Authors: Petr Klapetek, Sven Neumann, Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek & Sven Neumann 2003

Description: Evaluates distribution of grains (continuous parts of mask). (User guide)

Functions
TypeNameInformation
procgrain_distGrains → Distributions

grain_edge

Version: 0.6
Authors: Daniil Bratashov
Copyright: David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2011

Description: Marks grains by edge detection method. (User guide)

Functions
TypeNameInformation
procgrain_edgeGrains → Mark by Edge Detection

grain_filter

Version: 1.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Filters grains by their properties, using logical expressions and thresholds. (User guide)

Functions
TypeNameInformation
procgrain_filterGrains → Filter

grain_makesel

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Creates selections visualizing grains. (User guide)

Functions
TypeNameInformation
procgrain_inscribe_discsGrains → Select Inscribed Discs
procgrain_exscribe_circlesGrains → Select Circumscribed Circles
procgrain_inscribe_rectsGrains → Select Inscribed Rectangles
procgrain_exscribe_bboxesGrains → Select Bounding Boxes

grain_mark

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Marks grains by thresholding (height, slope, curvature). (User guide)

Functions
TypeNameInformation
procgrain_markGrains → Mark by Threshold

grain_stat

Version: 2.0
Authors: Petr Klapetek, Sven Neumann, Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek & Sven Neumann 2015

Description: Calculates statistics for all grain quantities. (User guide)

Functions
TypeNameInformation
procgrain_statGrains → Statistics

grain_summary

Version: 2.0
Authors: Petr Klapetek, Sven Neumann, Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek & Sven Neumann 2015

Description: Displays overall grain statistics. (User guide)

Functions
TypeNameInformation
procgrain_summaryGrains → Summary

grain_wshed

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Marks grains by watershed algorithm. (User guide)

Functions
TypeNameInformation
procgrain_wshedGrains → Mark by Watershed

grainmeasure

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2007

Description: Grain measurement tool, calculates characteristics of selected continuous parts of mask. (User guide)

Functions
TypeNameInformation
toolGwyToolGrainMeasureMeasure individual grains (continuous parts of mask)

grainremover

Version: 4.0
Authors: Petr Klapetek, Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Grain removal tool, removes continuous parts of mask and/or underlying data. (User guide)

Functions
TypeNameInformation
toolGwyToolGrainRemoverRemove individual grains (continuous parts of mask)

graph_align

Version: 1.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Aligns graph curves. (User guide)

Functions
TypeNameInformation
graphgraph_alignCorrect Data → Align

graph_cd

Version: 2.5
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Critical dimension measurements (User guide)

Functions
TypeNameInformation
graphgraph_cdMeasure Features → Critical Dimension

graph_cut

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2007

Description: Cut graph (User guide)

Functions
TypeNameInformation
graphgraph_cutBasic Operations → Cut

graph_dos_spectrum

Version: 0.2
Authors: Daniil Bratashov
Copyright: David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2010

Description: DOS Spectrum (User guide)

Functions
TypeNameInformation
graphdos_spectrumMeasure Features → DOS Spectrum

graph_export_ascii

Version: 3.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Exports graph data to text files. (User guide)

Functions
TypeNameInformation
graphgraph_export_asciiExport → Text

graph_export_bitmap

Version: 2.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Export graph into bitmap (User guide)

Functions
TypeNameInformation
graphgraph_export_bitmapExport → Bitmap

graph_export_vector

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Exports graphs to PostScript (User guide)

Functions
TypeNameInformation
graphgraph_export_vectorExport → PostScript

graph_fdfit

Version: 1.6
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2007

Description: Fit force-distance data (User guide)

Functions
TypeNameInformation
graphgraph_fdfitForce Distance → Fit FD Curve

graph_filter

Version: 0.4
Authors: Daniil Bratashov
Copyright: David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov (dn2010) 2012

Description: Remove graph noise by filtering. (User guide)

Functions
TypeNameInformation
graphgraph_filterCorrect Data → Filter

graph_fit

Version: 2.11
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Fit graph with function (User guide)

Functions
TypeNameInformation
graphgraph_fitMeasure Features → Fit Function

graph_flip

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Flip graph along the y axis. (User guide)

Functions
TypeNameInformation
graphgraph_flipBasic Operations → Flip

graph_fztofd

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Convert FZ to FD curve

Functions
TypeNameInformation
graphgraph_fztofdForce Distance → FZ to FD Curve

graph_invert

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Invert graph. (User guide)

Functions
TypeNameInformation
graphgraph_invertBasic Operations → Invert

graph_level

Version: 1.5
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Level graph by line. (User guide)

Functions
TypeNameInformation
graphgraph_levelCorrect Data → Level

graph_logscale

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Physically transforms graph data to logarithmic scale. (User guide)

Functions
TypeNameInformation
graphgraph_logscaleCorrect Data → Logscale Transform

graph_measure_period

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2023

Description: Evaluates the period of a one-dimensional periodic structure. (User guide)

Functions
TypeNameInformation
graphgraph_measure_periodMeasure Features → Period

graph_merge

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2023

Description: Merges and averages graph curves. (User guide)

Functions
TypeNameInformation
graphgraph_mergeCorrect Data → Merge Curves
graphgraph_averageCorrect Data → Average Curves

graph_peaks

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Finds peaks on graph curves. (User guide)

Functions
TypeNameInformation
graphgraph_peaksMeasure Features → Find Peaks

graph_polylevel

Version: 1.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Remove polynomial background

Functions
TypeNameInformation
graphgraph_polylevelForce Distance → Remove Polynomial Background

graph_sfuncs

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Calculates one-dimensional statistical functions (height distribution, correlations, PSDF). (User guide)

Functions
TypeNameInformation
graphgraph_sfuncsStatistics → Statistical Functions

graph_simplemech

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Get simple mechanical quantities

Functions
TypeNameInformation
graphgraph_simplemechForce Distance → Nanomechanical Fit

graph_sinebg

Version: 1.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2021

Description: Remove sine background

Functions
TypeNameInformation
graphgraph_sinebgForce Distance → Remove Sine Background

graph_stats

Version: 3.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2017

Description: Calculates simple graph curve statistics. (User guide)

Functions
TypeNameInformation
graphgraph_statsStatistics → Statistical Quantities

graph_terraces

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Fits terraces with polynomial background. (User guide)

Functions
TypeNameInformation
graphgraph_terracesMeasure Features → Terraces

gsffile

Version: 1.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2010

Description: Reads and exports Gwyddion Simple Field files. (User guide)

Functions
TypeNameInformation
filegsffileGwyddion Simple Field (.gsf)

gwyfile

Version: 0.18
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Loads and saves Gwyddion native data files (serialized objects). (User guide)

Functions
TypeNameInformation
filegwyfileGwyddion native format (.gwy)

gxyzffile

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2013

Description: Imports Gwyddion XYZ field files. (User guide)

Functions
TypeNameInformation
filegxyzfileGwyXYZ data files

hdf4file

Version: 0.8
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Hierarchical Data Format (HDF) files, version 4. (User guide)

Functions
TypeNameInformation
filepsifilePsi HDF4 files (.hdf)

hdf5file

Version: 1.3
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2020

Description: Imports files based on Hierarchical Data Format (HDF), version 5. (User guide)

Functions
TypeNameInformation
filehdf5genericGeneric HDF5 files (.h5)
filemat7xfileMatlab 7.x HDF5 MAT files (.mat)
fileergofileAsylum Research Ergo HDF5 files (.h5)
fileshilpsfileShilps Sciences Lucent HDF5 files (.h5)

hdrimage

Version: 3.4
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports 16bit grayscale PPM, PNG and TIFF images, imports and exports OpenEXR images (if available). (User guide)

Functions
TypeNameInformation
fileopenexrOpenEXR images (.exr)
filepng16PNG images with 16bit depth (.png)
filepgm16PGM images with 16bit depth (.pgm)
filetiffbigTIFF and BigTIFF images with high depth (.tiff)

hertz

Version: 0.2
Authors: Anna Charvatova Campbell
Copyright: Anna Charvatova Campbell 2017

Description: Calculates the apparent Young's modulus of a rough surface according to Hertzian contact theory.

Functions
TypeNameInformation
prochertz_modulusSPM Modes → Force and Indentation → Hertz contact

hitachi-afm

Version: 0.7
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek & Markus Pristovsek 2005

Description: Imports Hitachi AFM files. (User guide)

Functions
TypeNameInformation
filehitachi-afmHitachi AFM files (.afm)
filehitachi-afm-oldHitachi AFM files, old (.afm)

hitachi-sem

Version: 0.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports Hitachi S-3700 and S-4800 SEM files. (User guide)

Functions
TypeNameInformation
filehitachi-semHitachi SEM files (.txt + image)

hough

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Hough transform.

Functions
TypeNameInformation
prochoughIntegral Transforms → Hough

icolorange

Version: 4.2
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Interactive color range tool, allows selecting the data range false color scale should map to, either on data or on height distribution histogram. (User guide)

Functions
TypeNameInformation
toolGwyToolColorRangeStretch color range to part of data

igorfile

Version: 0.13
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports Igor binary waves (.ibw). (User guide)

Functions
TypeNameInformation
fileigorfileIgor binary waves (.ibw)

imgexport

Version: 3.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Renders data into vector (SVG, PDF, EPS) and pixmap (PNG, JPEG, TIFF, WebP, PPM, BMP, TARGA) images. Export to some formats relies on GDK and other libraries thus may be installation-dependent. (User guide)

Functions
TypeNameInformation
filepngcairoPortable Network Graphics (.png)
filejpegcairoJPEG (.jpeg,.jpg)
filetiffcairoTIFF (.tiff,.tif)
filepnmcairoPortable Pixmap (.ppm,.pnm)
filebmpcairoWindows or OS2 Bitmap (.bmp)
filetgacairoTARGA (.tga,.targa)
filewebpcairoWebP (.webp)
filejxlcairoJPEG XL (.jxl)
filepdfcairoPortable document format (.pdf)
fileepscairoEncapsulated PostScript (.eps)
filesvgcairoScalable Vector Graphics (.svg)

immerse

Version: 3.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Immerse high resolution detail into overall image. (User guide)

Functions
TypeNameInformation
procimmerseMultidata → Immerse Detail

indent_analyze

Version: 1.0
Authors: Lukáš Chvátal & Yeti
Copyright: Lukáš Chvátal 2005

Description: Analyses nanoindentation structure (volumes, surfaces, ...). (User guide)

Functions
TypeNameInformation
procindent_analyzeSPM Modes → Force and Indentation → Analyze Imprint

intelliwave

Version: 0.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Imports IntelliWave interferometric ESD data. (User guide)

Functions
TypeNameInformation
fileintelliwaveIntelliWave interferometric data (.esd)

intematix

Version: 0.4
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Intematix SDF data files. (User guide)

Functions
TypeNameInformation
fileintematixIntematix SDF data files (.sdf)

iso28600

Version: 0.4
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports and exports ISO 28600:2011 SPM data transfer format. (User guide)

Functions
TypeNameInformation
fileiso28600ISO 28600:2011 SPM data transfer files (.spm)

jeol

Version: 0.8
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports JEOL data files. (User guide)

Functions
TypeNameInformation
filejeolJEOL data files (.tif)

jeoltem

Version: 0.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Imports JEOL TEM images. (User guide)

Functions
TypeNameInformation
filejeol-temJEOL TIF TEM image (.tif)

jpkscan

Version: 0.16
Authors: Sven Neumann, Yeti
Copyright: JPK Instruments AG, David Nečas (Yeti) 2005-2007

Description: Imports JPK image scans. (User guide)

Functions
TypeNameInformation
filejpkscanJPK image scans (.jpk, .jpk-qi-image)
filejpkforceJPK force curves (.jpk-force, .jpk-force-map, .jpk-qi-data)

jspmfile

Version: 0.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Imports JEOL JSPM data files. (User guide)

Functions
TypeNameInformation
filejspmfileJEOL JSPM data files (.tif)

keyence

Version: 2.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Imports Keyence VK3, VK4, VK6 and VK7 files. (User guide)

Functions
TypeNameInformation
filekeyence3Keyence VK3 data files (.vk3)
filekeyence4Keyence VK4 data files (.vk4)
filekeyence6Keyence VK6 data files (.vk6)
filekeyence7Keyence VK7 data files (.vk7)

laplace

Version: 2.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Removes data under mask, interpolating them with Laplace equation solution. (User guide)

Functions
TypeNameInformation
proclaplaceCorrect Data → Interpolate Data Under Mask
proczeromaskedCorrect Data → Zero Data Under Mask

lat_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Generates surfaces based on regular or random lattices. (User guide)

Functions
TypeNameInformation
proclat_synthSynthetic → Lattice

latsim

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2012

Description: Lateral force simulator

Functions
TypeNameInformation
proclatsimSPM Modes → Force and Indentation → Lateral Force

lattice

Version: 1.2
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2013

Description: Layer allowing selection of a two-dimensional lattice. (User guide)

Functions
TypeNameInformation
layerGwyLayerLattice

leica

Version: 0.5
Authors: Daniil Bratashov
Copyright: Daniil Bratashov (dn2010), David Necas (Yeti) 2016

Description: Imports Leica CLSM image files (LIF). (User guide)

Functions
TypeNameInformation
fileleicaLeica LIF image files (.lif)

level

Version: 3.1
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Levels data by simple plane subtraction or by rotation, and fixes minimal or mean value to zero. (User guide)

Functions
TypeNameInformation
proclevelLevel → Plane Level
proclevel_rotateLevel → Level Rotate
procfix_zeroLevel → Fix Zero
proczero_meanLevel → Zero Mean Value
proczero_maxLevel → Zero Maximum Value

level3

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Three-point level tool, levels data by subtracting a plane fitted through three selected points. (User guide)

Functions
TypeNameInformation
toolGwyToolLevel3Level data by fitting a plane through three points

level_grains

Version: 2.0
Authors: David Nečas
Copyright: David Nečas (Yeti) 2011

Description: Levels individual grains, interpolating the shifts between using Laplacian interpolation. (User guide)

Functions
TypeNameInformation
proclevel_grainsGrains → Level Grains

lextfile

Version: 0.6
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2010

Description: Imports LEXT data files. (User guide)

Functions
TypeNameInformation
filelextOlympus LEXT OLS4000 (.lext)

line

Version: 3.8
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of arbitrary straight lines. (User guide)

Functions
TypeNameInformation
layerGwyLayerLine

linecorrect

Version: 1.12
Authors: Yeti, Luke Somers
Copyright: David Nečas (Yeti) & Petr Klapetek & Luke Somers 2004

Description: Corrects line defects (mostly experimental algorithms). (User guide)

Functions
TypeNameInformation
procline_correct_stepCorrect Data → Step Line Correction
procline_correct_invertedCorrect Data → Mark Inverted Rows

linematch

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Aligns rows by various methods. (User guide)

Functions
TypeNameInformation
procalign_rowsCorrect Data → Align Rows

linestats

Version: 3.1
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Row/column statistical function tool, mean values, medians, maxima, minima, RMS, ..., of rows or columns. (User guide)

Functions
TypeNameInformation
toolGwyToolLineStatsCalculate row/column statistical functions

lno_synth

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2010

Description: Generates various kinds of line noise. (User guide)

Functions
TypeNameInformation
proclno_synthSynthetic → Noise → Line Noise

local_contrast

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Maximizes local contrast. (User guide)

Functions
TypeNameInformation
proclocal_contrastPresentation → Local Contrast

logistic

Version: 0.5
Authors: Daniil Bratashov
Copyright: David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2016

Description: Trains logistic regression to mark grains. (User guide)

Functions
TypeNameInformation
proclogistic_regressionGrains → Logistic Regression

magellan

Version: 1.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2013

Description: Imports FEI Magellan SEM images. (User guide)

Functions
TypeNameInformation
filemagellanFEI Magellan SEM image (.tif)

mapvue

Version: 0.4
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports MapVue data files (.map). (User guide)

Functions
TypeNameInformation
filemapvueMapVue files (.map)

mark_disconn

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Creates mask of values disconnected to the rest. (User guide)

Functions
TypeNameInformation
procmark_disconnCorrect Data → Mask of Disconnected

mark_with

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Creates or modifies a mask using other channels. (User guide)

Functions
TypeNameInformation
procmark_withMask → Mark With

mask_distribute

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Distributes masks to other channels. (User guide)

Functions
TypeNameInformation
procmask_distributeMask → Distribute

mask_edt

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Performs simple and true Euclidean distance transforms of masks. (User guide)

Functions
TypeNameInformation
procmask_edtMask → Distance Transform

mask_morph

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Performs basic morphological operations with masks. (User guide)

Functions
TypeNameInformation
procmask_morphMask → Morphological Operation

mask_noisify

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2017

Description: Adds salt and/or pepper noise to mask. (User guide)

Functions
TypeNameInformation
procmask_noisifyMask → Noisify

mask_shift

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2020

Description: Shift mask with respect to the image. (User guide)

Functions
TypeNameInformation
procmask_shiftMask → Shift

maskcor

Version: 3.1
Authors: Petr Klapetek, Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Searches for a detail in another image using correlation. (User guide)

Functions
TypeNameInformation
procmaskcorMultidata → Correlation Search

maskedit

Version: 4.2
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Mask editor tool, allows interactive modification of parts of the mask. (User guide)

Functions
TypeNameInformation
toolGwyToolMaskEditorEdit mask

maskops

Version: 1.7
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Basic operations with mask: inversion, removal, extraction. (User guide)

Functions
TypeNameInformation
procmask_removeMask → Remove Mask
procmask_invertMask → Invert Mask
procmask_extractMask → Extract Mask
procgrain_extract_numbersGrains → Extract Numbers
procgrain_rem_touchingGrains → Remove Edge-Touching
procmask_thinMask → Thin

matfile

Version: 0.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports Matlab MAT files v5. (User guide)

Functions
TypeNameInformation
filemat5fileMatlab MAT 5 file (.mat)

mcrop

Version: 0.5
Authors: Daniil Bratashov
Copyright: David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2010

Description: Crops non-intersecting regions of two images. (User guide)

Functions
TypeNameInformation
procmcropMultidata → Mutual Crop

measure_lattice

Version: 3.5
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Measures parameters of two-dimensional lattices. (User guide)

Functions
TypeNameInformation
procmeasure_latticeMeasure Features → Lattice

median-bg

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts background using a rank-based algorithm. (User guide)

Functions
TypeNameInformation
procmedian-bgLevel → Median Level

merge

Version: 4.0
Authors: Petr Klapetek, Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Merges two images. (User guide)

Functions
TypeNameInformation
procmergeMultidata → Merge

metropro

Version: 1.3
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports binary MetroPro (Zygo) data files. (User guide)

Functions
TypeNameInformation
filemetroproMetroPro files (.dat)

mfm_current

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2017

Description: Simulation of current line magnetic field (User guide)

Functions
TypeNameInformation
procmfm_currentSPM Modes → Magnetic → Current Line Field

mfm_field

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2017

Description: Simulation of magnetic field above perpendicular media (User guide)

Functions
TypeNameInformation
procmfm_fieldSPM Modes → Magnetic → Perpendicular Media Field

mfm_findshift

Version: 1.3
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2017

Description: Lift height difference estimation from data blur (User guide)

Functions
TypeNameInformation
procmfm_findshiftSPM Modes → Magnetic → Estimate Shift in Z

mfm_parallel

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2017

Description: Simulation of parallel magnetic media (User guide)

Functions
TypeNameInformation
procmfm_parallelSPM Modes → Magnetic → Parallel Media Field

mfm_recalc

Version: 2.0
Authors: Petr Klapetek, Robb Puttock
Copyright: David Nečas (Yeti) & Petr Klapetek 2018

Description: Converts the MFM data to force gradient. (User guide)

Functions
TypeNameInformation
procmfm_recalcSPM Modes → Magnetic → Recalculate to Force Gradient

mfm_shift

Version: 2.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2017

Description: Simulation of magnetic field z component change for another level (User guide)

Functions
TypeNameInformation
procmfm_shiftSPM Modes → Magnetic → Field Shift in Z

microprof

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports MicroProf FRT profilometer data files. (User guide)

Functions
TypeNameInformation
filemicroprofMicroProf FRT files (.frt)
filemicroprof_txtMicroProf FRT text files (.txt)

miffile

Version: 0.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2010

Description: Imports DME MIF data files. (User guide)

Functions
TypeNameInformation
filemiffileDME MIF files (.mif)

mifile

Version: 0.18
Authors: Chris Anderson
Copyright: Chris Anderson, Molecular Imaging Corp. 2006

Description: Imports Molecular Imaging MI data files. (User guide)

Functions
TypeNameInformation
filemifilePicoView Data Files (.mi)

mulfile

Version: 0.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports Aarhus MUL files. (User guide)

Functions
TypeNameInformation
filemulfileAarhus MUL files (.mul)

multiprofile

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2020

Description: Displays and extracts scan line graphs from multiple images simultaneously. (User guide)

Functions
TypeNameInformation
procmultiprofileMultidata → Multiprofile

nanoeducator

Version: 0.6
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports Nanoeducator data files. (User guide)

Functions
TypeNameInformation
filenanoeducatorNanoeducator files (.mspm, .spm, .stm)

nanomagnetics

Version: 1.2
Authors: Sameer Grover
Copyright: Sameer Grover, Tata Institute of Fundamental Research 2012

Description: Imports Nanomagnetics' NMI file format version 3 and 5 (User guide)

Functions
TypeNameInformation
filenanomagneticsNanomagnetics File (.nmi)

nanonics

Version: 0.5
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports Nanonics NAN data files. (User guide)

Functions
TypeNameInformation
filenanonicsNanonics files (.nan)

nanonis

Version: 1.4
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Nanonis SXM data files. (User guide)

Functions
TypeNameInformation
filenanonisNanonis SXM files (.sxm)

nanonis-spec

Version: 1.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Imports Nanonis DAT spectrum files. (User guide)

Functions
TypeNameInformation
filenanonis_specNanonis spectrum files (.dat)

nanoobserver

Version: 2.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2012

Description: Reads Nano-Solution/NanoObserver .nao files. (User guide)

Functions
TypeNameInformation
filenanoobserverNano-Solution → NanoObserver data (.nao)

nanoscan

Version: 0.9
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports NanoScan XML files. (User guide)

Functions
TypeNameInformation
filenanoscanNanoScan XML files (.xml)

nanoscantech

Version: 0.16
Authors: Daniil Bratashov (dn2010@gmail.com)
Copyright: David Nečas (Yeti), Daniil Bratashov (dn2010), Antony Kikaxa 2012

Description: Imports NanoScanTech .nstdat files. (User guide)

Functions
TypeNameInformation
filenanoscantechNanoScanTech data (.nstdat)

nanoscope

Version: 0.49
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Imports Bruker Nanoscope data files, version 3 or newer. (User guide)

Functions
TypeNameInformation
filenanoscopeNanoscope III files

nanoscope-ii

Version: 0.3
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2007

Description: Imports Digital Instruments Nanoscope II data files. (User guide)

Functions
TypeNameInformation
filenanoscope-iiNanoscope II files

nanosystemz

Version: 0.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Imports NanoSystem profilometry data files. (User guide)

Functions
TypeNameInformation
filenanosystemzNanoSystem profilometry files (.spm)

nanotop

Version: 1.9
Authors: Alexander Kovalev
Copyright: Alexander Kovalev, Metal-Polymer Research Institute 2006

Description: Imports NANOTOP AFM files (User guide)

Functions
TypeNameInformation
filenanotopNanotop files (.spm)

netcdf

Version: 0.10
Authors: Yeti
Copyright: David Nečas (Yeti), Petr Klapetek & Niv Levy 2006

Description: Imports network Common Data Form (netCDF) files created by GXSM. (User guide)

Functions
TypeNameInformation
filegsxmfileGSXM netCDF files (.nc)

neural

Version: 2.4
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2012

Description: Neural network SPM data processing (User guide)

Functions
TypeNameInformation
procneural_trainMultidata → Neural Network Training
procneural_applyMultidata → Apply Neural Network

nmmxyz

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Imports Nano Measuring Machine profile files. (User guide)

Functions
TypeNameInformation
filenmmxyzNano Measuring Machine files (*.dsc)

noise_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2010

Description: Generates uncorrelated random noise. (User guide)

Functions
TypeNameInformation
procnoise_synthSynthetic → Noise → Noise

nova-asc

Version: 0.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2022

Description: Imports Nova ASC files. (User guide)

Functions
TypeNameInformation
filenova-ascNova ASCII files (.txt)

npyfile

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2023

Description: Imports and exports binary serialized numpy arrays (NPY, NPZ). (User guide)

Functions
TypeNameInformation
filenpyfileSerialized numpy array (.npy)
filenpzfileMultiple serialized numpy arrays (.npz)

nrrdfile

Version: 0.9
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports and exports nearly raw raster data (NRRD) files. (User guide)

Functions
TypeNameInformation
filenrrdfileNearly raw raster data (NRRD) files (.nrrd)

nt-mdt

Version: 0.25
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Imports NT-MDT data files. (User guide)

Functions
TypeNameInformation
filent-mdtNT-MDT files (.mdt)

nxiifile

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Imports EM4SYS data files. (User guide)

Functions
TypeNameInformation
filenxiifileEM4SYS NX II files (.bmp)

obj_synth

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Generates randomly patterned surfaces by placing objects. (User guide)

Functions
TypeNameInformation
procobj_synthSynthetic → Deposition → Objects

oirfile

Version: 0.8
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Imports Olympus OIR data files. (User guide)

Functions
TypeNameInformation
fileoirfileOlympus OIR data files (.oir)
filepoirfileOlympus packed OIR data files (.poir)

oldmda

Version: 0.4
Authors: dn2010
Copyright: David Nečas (Yeti) & Daniil Bratashov (dn2010) 2012

Description: Imports old NTMDT MDA Spectra files. (User guide)

Functions
TypeNameInformation
fileoldmdaNTMDT old MDA Spectra data (.sxml .dat)

ols

Version: 0.11
Authors: Jan Hořák, Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2008

Description: Imports OLS data files. (User guide)

Functions
TypeNameInformation
fileolsOlympus LEXT OLS3000 (.ols)

ometiff

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2013

Description: Imports OME-TIFF data files. (User guide)

Functions
TypeNameInformation
fileometiffOpen Microscopy OME-TIFF (.ome.tiff)

omicron

Version: 0.14
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek & Markus Pristovsek 2006

Description: Imports Omicron data files (two-part .par + .tf*, .tb*, .sf*, .sb*). (User guide)

Functions
TypeNameInformation
fileomicronOmicron files (.par + data)

omicronflat

Version: 2.5
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Imports Omicron flat files. (User guide)

Functions
TypeNameInformation
fileomicronflatOmicron flat files (*.*flat)

omicronmatrix

Version: 0.90
Authors: Philipp Rahe
Copyright: Philipp Rahe 2008

Description: Omicron MATRIX (param.mtrx & data.mtrx) (User guide)

Functions
TypeNameInformation
fileomicronmatrixOmicron MATRIX (.mtrx & .mtrx)

opdfile

Version: 0.12
Authors: Yeti
Copyright: David Nečas (Yeti) 2008

Description: Imports Wyko OPD and ASC files. (User guide)

Functions
TypeNameInformation
fileopdfileWyko OPD files (.opd)
fileopdfile-ascWyko ASCII export files (.asc)

opengps

Version: 1.4
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Reads ISO 5436-2 OpenGPS .x3p files. (User guide)

Functions
TypeNameInformation
fileopengpsISO 5436-2 OpenGPS data (.x3p)

otsu_threshold

Version: 1.2
Authors: Vinicius Barboza
Copyright: Brazilian Nanotechnology National Laboratory 2013

Description: Automated threshold using Otsu's method on heights. (User guide)

Functions
TypeNameInformation
procotsu-thresholdGrains → Mark by Otsu's

outliers

Version: 1.5
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Creates mask of outliers. (User guide)

Functions
TypeNameInformation
procoutliersCorrect Data → Mask of Outliers

pat_synth

Version: 3.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2010

Description: Generates surfaces representing simple patterns (staircase, amphitheater, grating, holes and pillars, ...). (User guide)

Functions
TypeNameInformation
procpat_synthSynthetic → Pattern

path

Version: 1.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Layer allowing selection of a single long curve. (User guide)

Functions
TypeNameInformation
layerGwyLayerPath

pathlevel

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2007

Description: Path level tool, performs row leveling along on user-set lines. (User guide)

Functions
TypeNameInformation
toolGwyToolPathLevelLevel rows using intersections with given lines

phase_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2017

Description: Generates phase-separated structures. (User guide)

Functions
TypeNameInformation
procphase_synthSynthetic → Order and Disorder → Phases

phoenix

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Imports AFM data files from NASA Phoenix Mars mission. (User guide)

Functions
TypeNameInformation
filephoenixAFM data from NASA Phoenix mission (.dat, .lbl + .tab)

pid

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2012

Description: A simple PID simulator

Functions
TypeNameInformation
procpidSPM Modes → Force and Indentation → PID Simulation

pileup_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2017

Description: Generates randomly patterned surfaces by piling up geometrical shapes. (User guide)

Functions
TypeNameInformation
procpileup_synthSynthetic → Deposition → Pile Up

pixmap

Version: 10.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2004-2014

Description: Imports data from low-depth pixmap images (PNG, TIFF, JPEG, ...). The set of available formats depends on available GDK pixbuf loaders. (User guide)

Functions
TypeNameInformation
filepngPortable Network Graphics (.png)
filejpegJPEG (.jpeg,.jpg)
filebmpWindows or OS2 Bitmap (.bmp)
filegifGraphics Interchange Format GIF (.gif)
fileicnsApple icon (.icns)
filejxlJPEG XL (.jxl)
filepnmPortable Pixmap (.ppm,.pnm)
filetgaTARGA (.tga,.targa)
filetiffTIFF (.tiff,.tif)
filewebpWebP (.webp)
filexpmX Pixmap (.xpm)

plateau_synth

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2023

Description: Generates images with stacked plateau-like structures. (User guide)

Functions
TypeNameInformation
procplateau_synthSynthetic → Deposition → Plateaus

pltfile

Version: 0.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports Nanosurf PLT files. (User guide)

Functions
TypeNameInformation
filepltfileNanosurf PLT files (.plt)

pnifile

Version: 0.8
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Pacific Nanotechnology PNI data files. (User guide)

Functions
TypeNameInformation
filepnifilePNI files (.pni)

point

Version: 3.5
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of several points, displayed as crosses or invisible. (User guide)

Functions
TypeNameInformation
layerGwyLayerPoint

polydistort

Version: 1.5
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2007

Description: Applies polynomial distortion in the horizontal plane. (User guide)

Functions
TypeNameInformation
procpolydistortDistortion → Polynomial

polylevel

Version: 4.1
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts polynomial background. (User guide)

Functions
TypeNameInformation
procpolylevelLevel → Polynomial Background

presentationops

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Basic operations with presentation: extraction, removal. (User guide)

Functions
TypeNameInformation
procpresentation_removePresentation → Remove Presentation
procpresentation_extractPresentation → Extract Presentation
procpresentation_attachPresentation → Attach Presentation
procpresentation_logscalePresentation → Logscale

princetonspe

Version: 0.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Princeton Instruments camera SPE files. (User guide)

Functions
TypeNameInformation
fileprincetonspePrinceton Instruments SPE files

profile

Version: 5.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Profile tool, creates profile graphs from selected lines. (User guide)

Functions
TypeNameInformation
toolGwyToolProfileExtract profiles along arbitrary lines

projective

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Layer allowing selection of a projective plane. (User guide)

Functions
TypeNameInformation
layerGwyLayerProjective

psdf2d

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Calculates two-dimensional power spectrum density function and extracts its linear profiles. (User guide)

Functions
TypeNameInformation
procpsdf2dStatistics → 2D PSDF

psdf_logphi

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Two-dimensional FFT (Fast Fourier Transform) transformed to coordinates (log-frequency, angle). (User guide)

Functions
TypeNameInformation
procpsdf_logphiStatistics → Log-Phi PSDF

psf

Version: 4.1
Authors: Petr Klapetek, Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2017

Description: Transfer function estimation (User guide)

Functions
TypeNameInformation
procpsfStatistics → Transfer Function Guess

psf-fit

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2017

Description: Transfer function estimation by fitting explicit function form. (User guide)

Functions
TypeNameInformation
procpsf-fitStatistics → Transfer Function Fit

psia

Version: 0.9
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Park Systems data files. (User guide)

Functions
TypeNameInformation
filepsiaPark Systems data files (.tiff, .tif)

psppt

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Imports Park Systems PS-PPT data files. (User guide)

Functions
TypeNameInformation
filepspptPark Systems PS-PPT data files (.ps-ppt)

pt3file

Version: 0.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports SymPhoTime data files, version 2.0. (User guide)

Functions
TypeNameInformation
filept3filePicoHarp files (.pt3)

pygwy

Version: 2.6
Authors: Jan Hořák, Yeti
Copyright: Jan Hořák & David Nečas (Yeti) 2007

Description: Pygwy, the Gwyddion Python wrapper. (User guide)

quazarnpic

Version: 0.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Imports Quazar data files stored as Python pickles v4. (User guide)

Functions
TypeNameInformation
filequazarnpicQuazar Python-pickled data (.npic)

quesant

Version: 0.6
Authors: Jan Hořák, Yeti
Copyright: David Nečas (Yeti) & Jan Hořák 2008

Description: Imports Quesant file format. (User guide)

Functions
TypeNameInformation
filequesantQuesant files (.afm)

rank

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2014

Description: Enhances local contrast using a rank transform. (User guide)

Functions
TypeNameInformation
procrankPresentation → Rank

rank_filter

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: General k-th rank filter replacing data with k-th rank values from the neighborhood. (User guide)

Functions
TypeNameInformation
procrank_filterIntegral Transforms → Rank Filter

raveraging

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2019

Description: Smooths images in polar coordinates. (User guide)

Functions
TypeNameInformation
procraveragingDistortion → Radial Smoothing

rawfile

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Imports raw data files, both ASCII and binary, according to user-specified format. (User guide)

Functions
TypeNameInformation
filerawfileRaw data files

rawgraph

Version: 0.8
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports simple text files as graph curves. (User guide)

Functions
TypeNameInformation
filerawgraphASCII graph curve files

readvalue

Version: 4.2
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Pointer tool, reads value under pointer. (User guide)

Functions
TypeNameInformation
toolGwyToolReadValueRead value under mouse cursor

rectangle

Version: 2.12
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of rectangular areas. (User guide)

Functions
TypeNameInformation
layerGwyLayerRectangle

relate

Version: 2.0
Authors: Yeti
Copyright: David Nečas 2018

Description: Plots one image data as a function of another and finds relations. (User guide)

Functions
TypeNameInformation
procrelateMultidata → Relation

renishaw

Version: 0.12
Authors: Daniil Bratashov
Copyright: Daniil Bratashov (dn2010), David Necas (Yeti), Renishaw plc. 2014

Description: Imports Renishaw WiRE data files (WDF). (User guide)

Functions
TypeNameInformation
filerenishawRenishaw WiRE data files (.wdf)

resample

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Resamples data to specified pixel size. (User guide)

Functions
TypeNameInformation
procresampleBasic Operations → Resample

rhk-sm3

Version: 0.16
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports RHK Technology SM3 data files. (User guide)

Functions
TypeNameInformation
filerhk-sm3RHK SM3 files (.sm3)

rhk-sm4

Version: 0.8
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports RHK Technology SM4 data files. (User guide)

Functions
TypeNameInformation
filerhk-sm4RHK SM4 files (.sm4)

rhk-spm32

Version: 0.12
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek, mod by Niv Levy 2007

Description: Imports RHK Technology SPM32 data files. (User guide)

Functions
TypeNameInformation
filerhk-spm32RHK SPM32 files (.sm2)

robotics

Version: 0.2
Authors: Mira
Copyright: Miroslav Valtr 2011

Description: Imports Automation & Robotics Dual Lensmapper data files (User guide)

Functions
TypeNameInformation
fileroboticsDual Lensmapper files

roddeposit_synth

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek 2017

Description: Generates rod-like particles using simple dynamical model (User guide)

Functions
TypeNameInformation
procrod_deposit_synthSynthetic → Deposition → Rods

rotate

Version: 3.1
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Rotates data by arbitrary angle or to make characteristic directions parallel with x or y axis. (User guide)

Functions
TypeNameInformation
procrotateBasic Operations → Rotate by Angle
procunrotateCorrect Data → Unrotate

roughness

Version: 3.1
Authors: Martin Hasoň, Yeti
Copyright: Martin Hasoň & David Nečas (Yeti) 2006

Description: Calculate surface profile parameters. (User guide)

Functions
TypeNameInformation
toolGwyToolRoughnessCalculate roughness parameters

rprofile

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2018

Description: Creates angularly averaged profile graphs. (User guide)

Functions
TypeNameInformation
toolGwyToolRprofileExtract angularly averaged profiles

s94file

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2013

Description: Imports S94 STM data files. (User guide)

Functions
TypeNameInformation
files94fileS94 STM files (.s94)

scale

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek & Dirk Kähler 2003

Description: Scales data by arbitrary factor. (User guide)

Functions
TypeNameInformation
procscaleBasic Operations → Scale

scars

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Marks and/or removes scars (horizontal linear artifacts). (User guide)

Functions
TypeNameInformation
procscars_markCorrect Data → Mark Scars
procscars_removeCorrect Data → Remove Scars

sdfile

Version: 0.14
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Surfstand group SDF (Surface Data File) files. (User guide)

Functions
TypeNameInformation
filesdfile-binSurfstand SDF files, binary (.sdf)
filesdfile-txtSurfstand SDF files, text (.sdf)
filemicromapMicromap SDF files (.sdfa)

seiko

Version: 0.13
Authors: Yeti
Copyright: David Nečas (Yeti) & Markus Pristovsek 2006

Description: Imports Seiko XQB, XQD, XQT and XQP files. (User guide)

Functions
TypeNameInformation
fileseikoSeiko files (.xqb, .xqd, .xqt, .xqp)

selectionmanager

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Grain removal tool, removes continuous parts of mask and/or underlying data. (User guide)

Functions
TypeNameInformation
toolGwyToolSelectionManagerDisplay, copy and export selections

semsim

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Simple SEM image simulation from topography. (User guide)

Functions
TypeNameInformation
procsemsimPresentation → SEM Image

sensofar

Version: 1.0
Authors: Jan Hořák, Yeti
Copyright: David Nečas (Yeti) & Jan Hořák 2008

Description: Imports Sensofar PLu file format, version 2000 or newer. (User guide)

Functions
TypeNameInformation
filesensofarSensofar PLu files (.plu, .apx)

sensofarx

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Reads Sensofar PLUx files. (User guide)

Functions
TypeNameInformation
filesensofarxSensofar PLUx files (.plux)

sensolytics

Version: 0.5
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports Sensolytics text files. (User guide)

Functions
TypeNameInformation
filesensolyticsSensolytics text files (.dat)

sfunctions

Version: 3.3
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Statistical function tool, calculates one-dimensional statistical functions (height distribution, correlations, PSDF, Minkowski functionals) of selected part of data. (User guide)

Functions
TypeNameInformation
toolGwyToolSFunctionsCalculate 1D statistical functions

shade

Version: 3.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Creates a shaded presentation of data. (User guide)

Functions
TypeNameInformation
procshadePresentation → Shading

shimadzu

Version: 0.6
Authors: Yeti
Copyright: David Nečas (Yeti) 2007

Description: Imports Shimadzu SPM data files. (User guide)

Functions
TypeNameInformation
fileshimadzuShimadzu files

sicmfile

Version: 1.3
Authors: Matthew Caldwell
Copyright: Matthew Caldwell 2007-2010

Description: Imports IonScope SICM data files. (User guide)

Functions
TypeNameInformation
filesicmIonScope SICM files (.img)

sis

Version: 0.17
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Imports SIS (Surface Imaging Systems) data files. (User guide)

Functions
TypeNameInformation
filesisSIS files (.sis)

slope_dist

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Calculates one- or two-dimensional distribution of slopes or graph of their angular distribution. (User guide)

Functions
TypeNameInformation
procslope_distStatistics → Slope Distribution

spcfile

Version: 0.3
Authors: Daniil Bratashov
Copyright: Daniil Bratashov (dn2010), David Necas (Yeti) 2018

Description: Imports Thermo Fisher SPC files. (User guide)

Functions
TypeNameInformation
filespcfileThermo Fisher SPC files

spectro

Version: 0.20
Authors: Owain Davies
Copyright: Owain Davies, David Nečas (Yeti) & Petr Klapetek 2006

Description: Point Spectrum, extracts point spectra to a graph. (User guide)

Functions
TypeNameInformation
toolGwyToolSpectroExtract and view point spectroscopy data

sphere-revolve

Version: 3.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts background by sphere revolution. (User guide)

Functions
TypeNameInformation
procsphere_revolveLevel → Revolve Sphere

spip-asc

Version: 0.8
Authors: Yeti
Copyright: David Nečas (Yeti) 2009

Description: Imports and exports SPIP ASC files. (User guide)

Functions
TypeNameInformation
filespip-ascSPIP ASCII files (.asc)

spml

Version: 0.2
Authors: Jan Hořák
Copyright: Jan Hořák 2006

Description: Loads SPML (Scanning Probe Microscopy Markup Language) data files. (User guide)

Functions
TypeNameInformation
filespmlSPML files (.xml)

spmlab

Version: 0.12
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Thermicroscopes SpmLab R3 to R7 data files. (User guide)

Functions
TypeNameInformation
filespmlabThermicroscopes SpmLab files

spmlabf

Version: 0.6
Authors: Yeti
Copyright: David Nečas (Yeti) 2008

Description: Imports SPMLab floating-point files. (User guide)

Functions
TypeNameInformation
filespmlabfSPMLab floating-point files (.flt)

spmxfile

Version: 1.4
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Reads ATC SPMxFormat files. (User guide)

Functions
TypeNameInformation
filespmxfileATC SPMxFormat data (.spm)

spotremove

Version: 4.2
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Spot removal tool, interpolates small parts of data (displayed on a zoomed view) using selected algorithm. (User guide)

Functions
TypeNameInformation
toolGwyToolSpotRemoverInterpolate small defects, manually selected

stats

Version: 4.3
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2003

Description: Statistics tool. (User guide)

Functions
TypeNameInformation
toolGwyToolStatsStatistical quantities

stitch

Version: 1.2
Authors: Petr Grolich
Copyright: Petr Klapetek & Petr Grolich 2017

Description: Stitch multiple images based on offsets of origins. (User guide)

Functions
TypeNameInformation
procstitchMultidata → Stitch

stmprg

Version: 0.12
Authors: Rok Zitko, Yeti
Copyright: Rok Zitko & David Nečas (Yeti) 2004

Description: Imports Omicron STMPRG data files (tp ta). (User guide)

Functions
TypeNameInformation
filestmprgOmicron STMPRG files (tp ta)

stpfile

Version: 0.5.3
Authors: Yeti
Copyright: David Nečas (Yeti), Petr Klapetek, Chris Anderson 2006

Description: Imports Molecular Imaging STP data files. (User guide)

Functions
TypeNameInformation
filestpfileSTP files (.stp)

straighten_path

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Extracts a straightened part of image along a curve. (User guide)

Functions
TypeNameInformation
procstraighten_pathDistortion → Straighten Path

surffile

Version: 0.12
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Surf data files. (User guide)

Functions
TypeNameInformation
filesurffileSurf files (.sur)

terracefit

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Fits terraces with polynomial background. (User guide)

Functions
TypeNameInformation
procterracefitMeasure Features → Terraces

tescan

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2013

Description: Imports Tescan SEM images. (User guide)

Functions
TypeNameInformation
filetescan-tifTescan TIF SEM image (.tif)
filetescan-pngTescan two-part SEM image (.hdr + .png)

threshold

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2010

Description: Limit the data range using a lower/upper threshold. (User guide)

Functions
TypeNameInformation
procthresholdBasic Operations → Limit Range

tiaser

Version: 0.5
Authors: dn2010
Copyright: David Nečas (Yeti), Daniil Bratashov (dn2010) 2012

Description: Imports FEI Tecnai imaging and analysis (former Emispec) files. (User guide)

Functions
TypeNameInformation
filetiaserFEI TIA (Emispec) data

tilt

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2008

Description: Tilts image by specified amount. (User guide)

Functions
TypeNameInformation
proctiltBasic Operations → Tilt

tip_blind

Version: 2.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Blind estimation of SPM tip using Villarubia's algorithm. (User guide)

Functions
TypeNameInformation
proctip_blindSPM Modes → Tip → Blind Estimation

tip_model

Version: 3.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2004

Description: Models SPM tip. (User guide)

Functions
TypeNameInformation
proctip_modelSPM Modes → Tip → Model Tip

tipops

Version: 2.0
Authors: Petr Klapetek, Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2006

Description: Tip operations: dilation (convolution), erosion (reconstruction) and certainty map. (User guide)

Functions
TypeNameInformation
proctip_dilationSPM Modes → Tip → Dilation
proctip_reconstructionSPM Modes → Tip → Surface Reconstruction
proctip_mapSPM Modes → Tip → Certainty Map

tipshape

Version: 2.1
Authors: Anna Charvatova Campbell
Copyright: Anna Charvatova Campbell 2018

Description: Calculates the tip area function.

Functions
TypeNameInformation
proctipshapeSPM Modes → Force and Indentation → Area function

trimmed-mean

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Trimmed mean filtering and leveling. (User guide)

Functions
TypeNameInformation
proctrimmed_meanLevel → Trimmed Mean

ttffile

Version: 1.0
Authors: Yeti, Thomas Wagner
Copyright: David Nečas (Yeti), Thomas Wagner 2019

Description: Imports Corning Tropel UltraSort files. (User guide)

Functions
TypeNameInformation
filettffileCorning Tropel UltraSort data (.ttf)
filecorningcsvfileCorning Tropel UltraSort CSV export (.csv)

unisoku

Version: 0.10
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Unisoku data files (two-part .hdr + .dat). (User guide)

Functions
TypeNameInformation
fileunisokuUnisoku files (.hdr + .dat)

volume_1dfft

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek & David Nečas (Yeti) 2023

Description: Performs 1D FFT filtering for all the volume data levels. (User guide)

Functions
TypeNameInformation
volumevolume_1dfft

volume_addframe

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek & David Nečas (Yeti) 2023

Description: Add one frame to volume data stack

Functions
TypeNameInformation
volumevolume_addframe

volume_arithmetic

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Simple arithmetic operations with volume data. (User guide)

Functions
TypeNameInformation
volumevolume_arithmetic

volume_asciiexport

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Exports volume data in simple ASCII formats. (User guide)

Functions
TypeNameInformation
volumevolume_asciiexport

volume_calibrate

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2013

Description: Recalibrate volume data dimensions or value range. (User guide)

Functions
TypeNameInformation
volumevolcal

volume_crop

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek & David Nečas (Yeti) 2023

Description: Performs XY plane cropping of all the levels.

Functions
TypeNameInformation
volumevolume_crop

volume_drift

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek 2023

Description: Estimates drift across stacked high-speed SPM frames. (User guide)

Functions
TypeNameInformation
volumevolume_drift

volume_equiplane

Version: 2.0
Authors: Petr Klapetek
Copyright: Petr Klapetek 2019

Description: Extracts z-coordinates of isosurfaces from volume data to an image.

Functions
TypeNameInformation
volumevolume_equiplane

volume_extract

Version: 2.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2013

Description: Shows 3D representations of volume data (User guide)

Functions
TypeNameInformation
volumeextract

volume_facetlevel

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2023

Description: Performs facet leveling on all XY planes (User guide)

Functions
TypeNameInformation
volumevolume_facetlevel

volume_fdfit

Version: 1.2
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2013

Description: Evaluate volume force-distance data (User guide)

Functions
TypeNameInformation
volumevolume_fdfit

volume_flattenbase

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2023

Description: Flattens base on all XY planes (User guide)

Functions
TypeNameInformation
volumevolume_flattenbase

volume_invert

Version: 1.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2013

Description: Inverts value in volume data (User guide)

Functions
TypeNameInformation
volumevolume_invert

volume_kmeans

Version: 2.0
Authors: Daniil Bratashov & Evgeniy Ryabov
Copyright: David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov & Evgeniy Ryabov 2014

Description: Calculates K-means clustering on volume data. (User guide)

Functions
TypeNameInformation
volumekmeans

volume_kmedians

Version: 2.0
Authors: Daniil Bratashov & Evgeniy Ryabov
Copyright: David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov & Evgeniy Ryabov 2014

Description: Calculates K-medians clustering on volume data. (User guide)

Functions
TypeNameInformation
volumekmedians

volume_lawnize

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Creates curve map data from volume data.

Functions
TypeNameInformation
volumevolume_lawnize

volume_linelevel

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek & David Nečas (Yeti) 2023

Description: Performe line leveling for all the volume data levels.

Functions
TypeNameInformation
volumevolume_linelevel

volume_linestat

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Summarizes profiles of volume data to a channel. (User guide)

Functions
TypeNameInformation
volumevolume_linestat

volume_localdetect

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek & David Nečas (Yeti) 2023

Description: Performs localization merge of all the levels (User guide)

Functions
TypeNameInformation
volumevolume_localdetect

volume_meanplanelevel

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2023

Description: Levels all XY planes by their mean plane (User guide)

Functions
TypeNameInformation
volumevolume_meanplanelevel

volume_mfmrecalc

Version: 2.0
Authors: Petr Klapetek, Robb Puttock
Copyright: David Nečas (Yeti) & Petr Klapetek 2018

Description: Converts the MFM data to force gradient. (User guide)

Functions
TypeNameInformation
volumevolume_mfmrecalc

volume_outliers

Version: 1.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2018

Description: Removes outliers from all XY planes (User guide)

Functions
TypeNameInformation
volumevolume_outliers

volume_planelevel

Version: 1.1
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2018

Description: Levels all XY planes (User guide)

Functions
TypeNameInformation
volumevolume_planelevel

volume_planestat

Version: 2.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Summarizes volume data planes to a graph. (User guide)

Functions
TypeNameInformation
volumevolume_planestat

volume_psf

Version: 3.0
Authors: Petr Klapetek
Copyright: Petr Klapetek, Robb Puttock & David Nečas (Yeti) 2018

Description: Calculates the volume PSF. (User guide)

Functions
TypeNameInformation
volumevolume_psf

volume_removeframe

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek & David Nečas (Yeti) 2023

Description: Remove one frame from volume data stack

Functions
TypeNameInformation
volumevolume_removeframe

volume_rephase

Version: 2.1
Authors: Petr Klapetek
Copyright: Petr Klapetek 2019

Description: Swaps phase in continuous data based on user's selection

Functions
TypeNameInformation
volumevolume_rephase

volume_scars

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek & David Nečas (Yeti) 2023

Description: Performs scars removal for all the volume data levels. (User guide)

Functions
TypeNameInformation
volumevolume_scars

volume_slice

Version: 3.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Extracts image planes and line graphs from volume data. (User guide)

Functions
TypeNameInformation
volumevolume_slice

volume_stepline

Version: 1.0
Authors: Yeti, Luke Somers, Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek & Luke Somers 2023

Description: Performs step line correction (User guide)

Functions
TypeNameInformation
volumevolume_stepline

volume_strayfield

Version: 2.0
Authors: Petr Klapetek
Copyright: Petr Klapetek, Robb Puttock & David Nečas (Yeti) 2018

Description: Checks the stray field dependence consistency. (User guide)

Functions
TypeNameInformation
volumevolume_strayfield

volume_swaxes

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2017

Description: Swaps axes of volume data. (User guide)

Functions
TypeNameInformation
volumevolume_swaxes

volume_xyarithmetics

Version: 1.1
Authors: Petr Klapetek,
Copyright: David Nečas (Yeti) & Petr Klapetek 2023

Description: Simple arithmetic operations with volume and plane data.

Functions
TypeNameInformation
volumevolume_xyarithmetics

volume_xystitch

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek & David Nečas (Yeti) 2023

Description: Merges all XY planes into XYZ data (User guide)

Functions
TypeNameInformation
volumevolume_xystitch

volume_zcal

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Attaches, extracts and removes volume data z-axis calibration. (User guide)

Functions
TypeNameInformation
volumevolume_zcal

volume_zposlevel

Version: 2.0
Authors: Petr Klapetek
Copyright: Petr Klapetek 2019

Description: Shifts values in z curves to be zero at defined position.

Functions
TypeNameInformation
volumevolume_zposlevel

volumeops

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2017

Description: Inverts value in volume data (User guide)

Functions
TypeNameInformation
volumeextract_preview

volumize

Version: 1.2
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2013

Description: Converts datafield to 3D volume data. (User guide)

Functions
TypeNameInformation
procvolumizeBasic Operations → Volumize

volumize_layers

Version: 3.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2013

Description: Converts all datafields to 3D volume data. (User guide)

Functions
TypeNameInformation
procvolumize_layersBasic Operations → Volumize Layers

wave_synth

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Generates various kinds of waves. (User guide)

Functions
TypeNameInformation
procwave_synthSynthetic → Waves

wfr_synth

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Generates images by simulating a propagating wetting front. (User guide)

Functions
TypeNameInformation
procwfr_synthSynthetic → Wetting

win_stm

Version: 0.6
Authors: Jeffrey J. Schwartz
Copyright: Jeffrey J. Schwartz April 2014

Description: Imports WinSTM (.stm) files. (User guide)

Functions
TypeNameInformation
filewin_stmWinSTM files (.stm)

wipfile

Version: 0.11
Authors: Daniil Bratashov
Copyright: David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2010

Description: Imports WItec Project data files. (User guide)

Functions
TypeNameInformation
filewipfileWItec Project files (.wip)

witec-asc

Version: 0.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports WITec ASCII export files. (User guide)

Functions
TypeNameInformation
filewitec-ascWITec ASCII files (.dat)

witfile

Version: 0.7
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports WITec WIT data files. (User guide)

Functions
TypeNameInformation
filewitfileWITec files (.wit)

wpour_mark

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2014

Description: Segments image using watershed with pre- and postprocessing. (User guide)

Functions
TypeNameInformation
procwpour_markGrains → Mark by Segmentation

wrapvalue

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2019

Description: Wraps periodic values to a different range. (User guide)

Functions
TypeNameInformation
procwrapvalueBasic Operations → Wrap Value

wrustfile

Version: 1.3
Authors: Yeti
Copyright: David Nečas (Yeti) 2021

Description: Imports AFM files from Department of Nanometrology, WRUST. (User guide)

Functions
TypeNameInformation
filewrustfileWRUST Department of Nanometrology AFM data (.dat)

wsffile

Version: 0.6
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports WSF ASCII files. (User guide)

Functions
TypeNameInformation
filewsffileWSF ASCII files (.wsf)

wsxmfile

Version: 0.22
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Nanotec WSxM data files. (User guide)

Functions
TypeNameInformation
filewsxmfileWSxM files (.tom, .top, .stp)
filewsxmcurveWSxM curve files (.cur)

xydenoise

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2012

Description: Denoises measurement on basis of two orthogonal scans. (User guide)

Functions
TypeNameInformation
procxydenoiseMultidata → XY Denoise

xyz_autocrop

Version: 1.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2023

Description: Simple XYZ automated crop.

Functions
TypeNameInformation
xyzautocrop

xyz_channels

Version: 2.0
Authors: Petr Klapetek
Copyright: David Nečas (Yeti) & Petr Klapetek 2018

Description: Converts three channels to XYZ data. (User guide)

Functions
TypeNameInformation
procxyz_channelsBasic Operations → XYZ from Channels

xyz_crop

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek 2023

Description: XYZ data crop.

Functions
TypeNameInformation
xyzxyz_crop

xyz_level

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Simple XYZ data leveling. (User guide)

Functions
TypeNameInformation
xyzxyz_fix_zero
xyzxyz_zero_mean
xyzxyz_level

xyz_raster

Version: 2.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Rasterizes XYZ data to images. (User guide)

Functions
TypeNameInformation
xyzxyz_raster

xyz_split

Version: 2.0
Authors: Petr Klapetek
Copyright: Petr Klapetek 2019

Description: XYZ data split based on direction.

Functions
TypeNameInformation
xyzxyz_split

xyz_tcut

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek 2023

Description: XYZ data crop as time series.

Functions
TypeNameInformation
xyzxyz_tcut

xyz_zdrift

Version: 1.0
Authors: Petr Klapetek
Copyright: Petr Klapetek 2023

Description: XYZ data z-drift correction.

Functions
TypeNameInformation
xyzxyz_zdrift

xyzexport

Version: 3.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2015

Description: Exports data as simple XYZ text file. (User guide)

Functions
TypeNameInformation
filexyzexportXYZ text data (.xyz)

xyzize

Version: 1.2
Authors: Yeti
Copyright: David Nečas (Yeti) 2016

Description: Converts data fields to XYZ data. (User guide)

Functions
TypeNameInformation
procxyzizeBasic Operations → XYZize

xyzops

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2018

Description: Elementary XYZ data operations. (User guide)

Functions
TypeNameInformation
xyzxyz_merge
xyzxyz_average

zeiss

Version: 0.6
Authors: Yeti
Copyright: David Nečas (Yeti) 2011

Description: Imports Carl Zeiss SEM images. (User guide)

Functions
TypeNameInformation
filezeissCarl Zeiss SEM scans (.tif)

zeisslsm

Version: 0.4
Authors: Daniil Bratashov
Copyright: Daniil Bratashov (dn2010), David Nečas (Yeti) 2017

Description: Imports Carl Zeiss CLSM images. (User guide)

Functions
TypeNameInformation
filezeisslsmCarl Zeiss CLSM images (.lsm)

zemax

Version: 1.1
Authors: Yeti
Copyright: David Nečas (Yeti) 2013

Description: Imports Zemax grid sag data files. (User guide)

Functions
TypeNameInformation
filezemaxZemax grid sag data (.dat)

zero_crossing

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) & Petr Klapetek 2019

Description: Zero crossing edge detection. (User guide)

Functions
TypeNameInformation
proczero_crossingPresentation → Edge Detection → Zero Crossing

zonfile

Version: 1.0
Authors: Yeti
Copyright: David Nečas (Yeti) 2023

Description: Reads Keyence ZON files. (User guide)

Functions
TypeNameInformation
filezonfileKeyence ZON data (.zon)
1.4 (yeti, 2014-06-08 11:10:03)
© David Nečas and Petr Klapetek

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