Gwyddion – Free SPM (AFM, SNOM/NSOM, STM, MFM, …) data analysis software

Module List

Other available formats: French, Russian, English plain expanded table.

NameVersionAuthors

Module: accurexii-txt-1.1
© David Nečas (Yeti) 2014

Description: Imports Accurex II text files.

Functions:
TypeNameInformation
fileaccurexii-txtAccurex II text files (.txt)

accurexii-txt

1.1Yeti

Module: acf2d-3.0
© David Nečas (Yeti) 2007

Description: Calculates and analyzes two-dimensional autocorrelation function.

Functions:
TypeNameInformation
procacf2dStatistics → 2D Autocorrelation

acf2d

3.0Yeti

Module: afmw-spec-1.1
© David Nečas (Yeti) 2018

Description: Imports AFM Workshop spectrum files.

Functions:
TypeNameInformation
fileafmw_specAFM Workshop spectrum files (.csv)

afmw-spec

1.1Yeti

Module: aistfile-0.5.3
© David Nečas (Yeti) 2009

Description: Imports AIST-NT data files.

Functions:
TypeNameInformation
fileaistfileAIST-NT files (.aist)

aistfile

0.5.3Yeti

Module: alicona-0.4
© David Nečas (Yeti) 2011

Description: Imports Alicona Imaging AL3D files.

Functions:
TypeNameInformation
filealiconaAlicona Imaging AL3D files (.al3d)

alicona

0.4Yeti

Module: ambfile-0.3
© David Nečas (Yeti) 2011

Description: Imports Ambios AMB data files.

Functions:
TypeNameInformation
fileambfileAmbios amb files (.amb)

ambfile

0.3Yeti

Module: ambprofile-1.0
© David Nečas (Yeti) 2016

Description: Imports Ambios 1D profilometry data files.

Functions:
TypeNameInformation
fileambprofxmlAmbios 1D profilometry data files (.xml)
fileambprofdatAmbios 1D profilometry data files (.dat)

ambprofile

1.0Yeti

Module: anasys_xml-0.8
© Jeffrey J. Schwartz September 2018

Description: Imports Analysis Studio XML (.axz & .axd) files.

Functions:
TypeNameInformation
fileanasys_xmlAnalysis Studio XML (.axz, .axd)

anasys_xml

0.8Jeffrey J. Schwartz

Module: andorsif-0.1
© David Nečas (Yeti) 2023

Description: Imports Andor SIF data files.

Functions:
TypeNameInformation
fileandorsifAndor SIF files (.sif)

andorsif

0.1Yeti

Module: anfatec-0.6
© David Nečas (Yeti) 2010

Description: Imports Anfatec data files (two-part .txt + .int).

Functions:
TypeNameInformation
fileanfatecAnfatec files (.par + .int)

anfatec

0.6Yeti

Module: angle_dist-2.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Calculates two-dimensional distribution of angles, that is projections of slopes to all directions.

Functions:
TypeNameInformation
procangle_distStatistics → Angle Distribution

angle_dist

2.0Yeti

Module: anneal_synth-2.0
© David Nečas (Yeti) 2019

Description: Generates images by annealing a lattice gas model.

Functions:
TypeNameInformation
procanneal_synthSynthetic → Order and Disorder → Anneal

anneal_synth

2.0Yeti

Module: apedaxfile-0.8.1
© A.P.E. Research srl 2015

Description: Imports A.P.E. Research DAX data files.

Functions:
TypeNameInformation
fileapedaxfileA.P.E. Research DAX Files (.dax) and APDT File (.apdt)

apedaxfile

0.8.1Andrea Cervesato, Gianfranco Gallizia, Samo Ziberna

Module: apefile-0.13
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports APE (Applied Physics and Engineering) data files.

Functions:
TypeNameInformation
fileapefileAPE files (.dat)

apefile

0.13Yeti

Module: arc-revolve-2.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts background by arc revolution.

Functions:
TypeNameInformation
procarc_revolveLevel → Revolve Arc

arc-revolve

2.0Yeti

Module: ardf-0.1
© Vojtech Klapetek, Matt Poss 2023

Description: Imports Asylum Research ARDF files.

Functions:
TypeNameInformation
fileardfARDF file (.ARDF)

ardf

0.1Vojtech Klapetek

Module: arithmetic-4.0
© David Nečas (Yeti) 2004

Description: Simple arithmetic operations with data fields.

Functions:
TypeNameInformation
procarithmeticMultidata → Arithmetic

arithmetic

4.0Yeti

Module: asciiexport-3.0
© David Nečas (Yeti) 2004

Description: Exports data as simple ASCII matrix and reads back this format.

Functions:
TypeNameInformation
fileasciiexportASCII data matrix (.txt)

asciiexport

3.0Yeti

Module: assing-afm-0.18
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Assing AFM data files.

Functions:
TypeNameInformation
fileassing-afmAssing AFM files (.afm)

assing-afm

0.18Yeti

Module: attocube-0.4
© David Nečas (Yeti) 2009

Description: Imports Attocube Systems ASC files.

Functions:
TypeNameInformation
fileattocubeAttocube ASCII files (.asc)

attocube

0.4Yeti

Module: averaging-0.2
© David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2011

Description: Similar structures averaging using autocorrelation

Functions:
TypeNameInformation
procaveragingCorrect Data → Correlation Averaging

averaging

0.2Daniil Bratashov

Module: axis-2.9
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of horizontal or vertical lines.

Functions:
TypeNameInformation
layerGwyLayerAxis

axis

2.9Yeti

Module: basicops-2.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Basic operations like flipping, value inversion, and rotation by multiples of 90 degrees.

Functions:
TypeNameInformation
procinvert_valueBasic Operations → Invert Value
procflip_horizontallyBasic Operations → Flip Horizontally
procflip_verticallyBasic Operations → Flip Vertically
procflip_diagonallyBasic Operations → Flip Diagonally
procrotate_180Basic Operations → Flip Both
procrotate_90_cwBasic Operations → Rotate Clockwise
procrotate_90_ccwBasic Operations → Rotate Counterclockwise
procsquare_samplesBasic Operations → Square Samples
procnull_offsetsBasic Operations → Null Offsets

basicops

2.0Yeti

Module: bcrfile-0.18
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Image Metrology BCR data files.

Functions:
TypeNameInformation
filebcrfileBCR files (.bcr, .bcrf)

bcrfile

0.18Yeti

Module: bdep_synth-2.0
© David Nečas (Yeti) 2015

Description: Generates surfaces by ballistic deposition.

Functions:
TypeNameInformation
procbdep_synthSynthetic → Deposition → Ballistic

bdep_synth

2.0Yeti

Module: binning-2.0
© David Nečas (Yeti) 2017

Description: Creates a smaller image using binning.

Functions:
TypeNameInformation
procbinningBasic Operations → Binning

binning

2.0Yeti

Module: blockstep-1.0
© David Nečas (Yeti) 2023

Description: Corrects vertical steps in scan lines by block.

Functions:
TypeNameInformation
procblock_correct_stepCorrect Data → Step Block Correction

blockstep

1.0Yeti

Module: burleigh-0.6
© David Nečas (Yeti) & Petr Klapetek & Hans-Peter Doerr 2006

Description: Imports Burleigh IMG data files version 2.1.

Functions:
TypeNameInformation
fileburleighBurleigh 2.1 files (.img)

burleigh

0.6Yeti

Module: burleigh_bii-0.3
© Jan Hořák & David Nečas (Yeti) & Petr Klapetek 2008

Description: Imports Burleigh BII binary data files.

Functions:
TypeNameInformation
fileburleigh_biiBurleigh Image Studio files (.bii)

burleigh_bii

0.3Jan Hořák, Yeti

Module: burleigh_exp-0.2
© David Nečas (Yeti) 2007

Description: Imports Burleigh text/bin exported images.

Functions:
TypeNameInformation
fileburleigh_expBurleigh exported data (.txt, .bin)

burleigh_exp

0.2Yeti

Module: calcoefs_load-1.1
© David Nečas (Yeti) & Petr Klapetek 2010

Description: Load calibration data from text file

Functions:
TypeNameInformation
proccloadCalibration → Load From Text File

calcoefs_load

1.1Petr Klapetek

Module: calcoefs_new-1.0
© David Nečas (Yeti) & Petr Klapetek 2010

Description: Create simple calibration data

Functions:
TypeNameInformation
proccnewCalibration → Create

calcoefs_new

1.0Petr Klapetek

Module: calcoefs_simple-1.1
© David Nečas (Yeti) & Petr Klapetek 2010

Description: Simple error map based on grating measurements

Functions:
TypeNameInformation
procsimpleCalibration → Get Simple Errop Map

calcoefs_simple

1.1Petr Klapetek

Module: calcoefs_view-1.0
© David Nečas (Yeti) & Petr Klapetek 2010

Description: 3D calibration/uncertainty

Functions:
TypeNameInformation
proccc_viewCalibration → Apply to Data

calcoefs_view

1.0Petr Klapetek

Module: calibrate-4.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Recalibrates scan lateral dimensions or value range.

Functions:
TypeNameInformation
proccalibrateBasic Operations → Dimensions and Units
xyzxyz_calibrate
cmapcmap_calibrate

calibrate

4.0Petr Klapetek

Module: classify-1.1
© Petr Klapetek 2020

Description: Classify data sets using multiple data fields.

Functions:
TypeNameInformation
procclassifyMultidata → Classify

classify

1.1Petr Klapetek

Module: cmap_align-1.0
© David Nečas (Yeti) 2021

Description: Aligns curves in a curve map by shifting the values.

Functions:
TypeNameInformation
cmapcmap_align

cmap_align

1.0Yeti

Module: cmap_basicops-1.0
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Basic operations like flipping and rotation by multiples of 90 degrees.

Functions:
TypeNameInformation
cmapcmap_flip_horizontally
cmapcmap_flip_vertically
cmapcmap_rotate_180
cmapcmap_rotate_90_cw
cmapcmap_rotate_90_ccw
cmapcmap_null_offsets
cmapcmap_remove_segments

cmap_basicops

1.0Yeti

Module: cmap_crop-1.0
© David Nečas (Yeti) 2021

Description: Crop curve map data.

Functions:
TypeNameInformation
cmapcmap_crop

cmap_crop

1.0Yeti

Module: cmap_cutter-1.0
© David Nečas (Yeti) 2021

Description: Cuts a curve map to segments.

Functions:
TypeNameInformation
cmapcmap_cutter

cmap_cutter

1.0Yeti

Module: cmap_extractcurve-1.0
© David Nečas (Yeti) 2021

Description: Extracts individual curves from a curve map.

Functions:
TypeNameInformation
cmapcmap_extractcurve

cmap_extractcurve

1.0Yeti

Module: cmap_fdfit-1.0
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Fit FD curves.

Functions:
TypeNameInformation
cmapcmap_fdfit

cmap_fdfit

1.0Petr Klapetek

Module: cmap_fztofd-1.0
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Converts FZ to FD curve map.

Functions:
TypeNameInformation
cmapcmap_fztofd

cmap_fztofd

1.0Petr Klapetek

Module: cmap_linestat-1.0
© David Nečas (Yeti) 2021

Description: Summarizes curves in curve map data to an image.

Functions:
TypeNameInformation
cmapcmap_linestat

cmap_linestat

1.0Yeti

Module: cmap_lockin-1.0
© David Nečas (Yeti) & Petr Klapetek 2022

Description: Detect oscillations in a curve.

Functions:
TypeNameInformation
cmapcmap_lockin

cmap_lockin

1.0Petr Klapetek

Module: cmap_polylevel-1.0
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Removes polynomial background from curves.

Functions:
TypeNameInformation
cmapcmap_polylevel

cmap_polylevel

1.0Petr Klapetek

Module: cmap_possearch-1.0
© David Nečas (Yeti) & Petr Klapetek 2022

Description: Picks a quantity at some threshold position.

Functions:
TypeNameInformation
cmapcmap_possearch

cmap_possearch

1.0Petr Klapetek

Module: cmap_simplemech-1.0
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Get simple mechanical quantities

Functions:
TypeNameInformation
cmapcmap_simplemech

cmap_simplemech

1.0Yeti, Petr Klapetek

Module: cmap_sinebg-1.0
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Remove sine background from curves.

Functions:
TypeNameInformation
cmapcmap_sinebg

cmap_sinebg

1.0Petr Klapetek

Module: codevfile-0.3
© David Nečas (Yeti) 2011

Description: Imports Code V interferogram files.

Functions:
TypeNameInformation
filecodevfileCode V interferogram files (.int)

codevfile

0.3Yeti

Module: coerce-2.0
© David Nečas (Yeti) 2016

Description: Transforms surfaces to have prescribed statistical properties.

Functions:
TypeNameInformation
proccoerceDistortion → Coerce

coerce

2.0Yeti

Module: col_synth-2.0
© David Nečas (Yeti) 2014

Description: Generates columnar surfaces by a simple growth algorithm.

Functions:
TypeNameInformation
proccol_synthSynthetic → Deposition → Columnar

col_synth

2.0Yeti

Module: convolution_filter-1.7
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Generic convolution filter with a user-defined matrix.

Functions:
TypeNameInformation
procconvolution_filterIntegral Transforms → Convolution Filter

convolution_filter

1.7Yeti

Module: convolve-2.0
© David Nečas (Yeti) 2018

Description: Convolves two images.

Functions:
TypeNameInformation
procconvolveMultidata → Convolve

convolve

2.0Yeti

Module: correct_affine-2.1
© David Nečas (Yeti) 2013

Description: Corrects affine distortion of images by matching image Bravais lattice to the true one.

Functions:
TypeNameInformation
proccorrect_affineDistortion → Affine

correct_affine

2.1Yeti

Module: correct_perspective-2.2
© David Nečas (Yeti) 2021

Description: Corrects or applies perspective distortion of images.

Functions:
TypeNameInformation
proccorrect_perspectiveDistortion → Perspective

correct_perspective

2.2Yeti

Module: corrlen-2.2
© David Nečas (Yeti) 2020

Description: Correlation length tool.

Functions:
TypeNameInformation
toolGwyToolCorrLenCorrelation Length

corrlen

2.2Yeti

Module: cpde_synth-3.0
© David Nečas (Yeti) 2019

Description: Generates images by assorted coupled partial differential equation models.

Functions:
TypeNameInformation
proccpde_synthSynthetic → Order and Disorder → Coupled PDEs

cpde_synth

3.0Yeti

Module: cprofile-2.1
© David Nečas (Yeti) 2019

Description: Profile tool which reads horizontal and/or vertical scan lines.

Functions:
TypeNameInformation
toolGwyToolCprofileRead horizontal and/or vertical profiles

cprofile

2.1Yeti

Module: createc-1.2
© Rok Zitko, David Nečas (Yeti) 2004

Description: Imports Createc data files.

Functions:
TypeNameInformation
filecreatecCreatec files (.dat)

createc

1.2Rok Zitko

Module: crop-3.2
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Crop tool, crops data to smaller size.

Functions:
TypeNameInformation
toolGwyToolCropCrop data

crop

3.2Yeti

Module: cross-1.2
© David Nečas (Yeti) 2019

Description: Layer allowing selection of combined horizontal and vertical lines.

Functions:
TypeNameInformation
layerGwyLayerCross

cross

1.2Yeti

Module: crosscor-2.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Calculates cross-correlation of two data fields.

Functions:
TypeNameInformation
proccrosscorMultidata → Cross-Correlation

crosscor

2.0Petr Klapetek

Module: csmfile-0.3
© David Nečas (Yeti) 2011

Description: Imports Benyuan CSM data files.

Functions:
TypeNameInformation
filecsmfileBenyuan CSM files (.csm)

csmfile

0.3Yeti

Module: curvature-3.1
© David Nečas (Yeti) 2009

Description: Calculates overall curvature.

Functions:
TypeNameInformation
proccurvatureMeasure Features → Curvature

curvature

3.1Yeti

Module: cwt-2.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Two-dimensional CWT (Continuous Wavelet Transform).

Functions:
TypeNameInformation
proccwtIntegral Transforms → 2D CWT

cwt

2.0Petr Klapetek

Module: deconvolve-2.0
© David Nečas (Yeti) 2018

Description: Regularized image deconvolution.

Functions:
TypeNameInformation
procdeconvolveMultidata → Deconvolve

deconvolve

2.0Yeti

Module: dektakvca-0.2
© David Nečas (Yeti) 2017

Description: Imports Dektak OPDx data files.

Functions:
TypeNameInformation
filedektakvcaDektak OPDx data files (.OPDx)

dektakvca

0.2Yeti

Module: dektakxml-0.2
© David Nečas (Yeti) 2016

Description: Imports Dektak XML data files.

Functions:
TypeNameInformation
filedektakxmlDektak XML data files (.xml)

dektakxml

0.2Yeti

Module: deposit_synth-2.0
© Petr Klapetek 2010

Description: Generates particles using simple dynamical model

Functions:
TypeNameInformation
procdeposit_synthSynthetic → Deposition → Particles

deposit_synth

2.0Petr Klapetek

Module: diff_synth-2.0
© David Nečas (Yeti) 2014

Description: Generates surfaces by diffusion limited aggregation.

Functions:
TypeNameInformation
procdiff_synthSynthetic → Deposition → Diffusion

diff_synth

2.0Yeti

Module: dimensionfile-0.1
© David Nečas (Yeti) 2016

Description: Imports old Veeco Dimension 3100D files.

Functions:
TypeNameInformation
filedimensionfileDimension 3100D files (.001, .002, ...)

dimensionfile

0.1Yeti

Module: disc_synth-2.0
© David Nečas (Yeti) 2018

Description: Generates random more or less touching discs.

Functions:
TypeNameInformation
procdisc_synthSynthetic → Discs

disc_synth

2.0Yeti

Module: displfield-2.0
© David Nečas (Yeti) 2019

Description: Distorts image or individual scan lines in plane using a displacement field.

Functions:
TypeNameInformation
procdisplfieldDistortion → Displacement Field

displfield

2.0Yeti

Module: distance-3.1
© Nenad Ocelic & David Nečas (Yeti) & Petr Klapetek 2004

Description: Distance measurement tool, measures distances and angles.

Functions:
TypeNameInformation
toolGwyToolDistanceMeasure distances and directions between points

distance

3.1Nenad Ocelic

Module: dm3file-2.4
© David Nečas (Yeti) 2012

Description: Reads Digital Micrograph DM3 and DM4 files.

Functions:
TypeNameInformation
filedm3fileDigital Micrograph DM3 TEM data (.dm3)
filedm4fileDigital Micrograph DM4 TEM data (.dm4)

dm3file

2.4Yeti

Module: dmefile-0.5.1
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Danish Micro Engineering (DME) data files.

Functions:
TypeNameInformation
filedmefileDME files (.img)

dmefile

0.5.1Yeti

Module: domain_synth-3.1
© David Nečas (Yeti) 2014

Description: Generates domain images using a hybrid Ising model.

Functions:
TypeNameInformation
procdomain_synthSynthetic → Order and Disorder → Domains

domain_synth

3.1Yeti

Module: drift-3.0
© David Nečas (Yeti) & Petr Klapetek 2007

Description: Evaluates and/or correct thermal drift in fast scan axis.

Functions:
TypeNameInformation
procdriftDistortion → Compensate Drift

drift

3.0Petr Klapetek, Yeti

Module: dumbfile-1.2
© David Nečas (Yeti) 2011

Description: Reads and exports Gwyddion dumb dump files.

Functions:
TypeNameInformation
filedumbfileGwyddion dumb dump files (.dump)

dumbfile

1.2Yeti

Module: dune_synth-1.0
© David Nečas (Yeti) 2022

Description: Generates images by simulating formation of sand dunes.

Functions:
TypeNameInformation
procdune_synthSynthetic → Deposition → Dunes

dune_synth

1.0Yeti

Module: dwt-2.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Two-dimensional DWT (Discrete Wavelet Transform).

Functions:
TypeNameInformation
procdwtIntegral Transforms → 2D DWT

dwt

2.0Petr Klapetek

Module: dwtanisotropy-2.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: 2D DWT anisotropy detection based on X/Y components ratio.

Functions:
TypeNameInformation
procdwtanisotropyIntegral Transforms → DWT Anisotropy

dwtanisotropy

2.0Petr Klapetek

Module: ecsfile-0.7
© David Nečas (Yeti) & Petr Klapetek & Markus Pristovsek 2006

Description: Imports ECS IMG files.

Functions:
TypeNameInformation
fileecsfileECS files (.img)

ecsfile

0.7Yeti

Module: edge-1.15
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Several edge detection methods (Laplacian of Gaussian, Canny, and some experimental), creates presentation.

Functions:
TypeNameInformation
procedge_laplacianPresentation → Edge Detection → Laplacian of Gaussian
procedge_cannyPresentation → Edge Detection → Canny
procedge_rmsPresentation → Edge Detection → RMS
procedge_rms_edgePresentation → Edge Detection → RMS Edge
procedge_nonlinearityPresentation → Edge Detection → Local Nonlinearity
procedge_hough_linesPresentation → Edge Detection → Hough Lines
procedge_harrisPresentation → Edge Detection → Harris Corner
procedge_inclinationPresentation → Edge Detection → Inclination
procedge_stepPresentation → Edge Detection → Step
procedge_sobelPresentation → Edge Detection → Sobel
procedge_prewittPresentation → Edge Detection → Prewitt
procslope_mapIntegral Transforms → Local Slope

edge

1.15Petr Klapetek

Module: ellipse-1.9
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Layer allowing selection of elliptic areas.

Functions:
TypeNameInformation
layerGwyLayerEllipse

ellipse

1.9Yeti

Module: entropy-2.0
© David Nečas (Yeti) 2015

Description: Visualizes entropy calculation for value and slope distribution.

Functions:
TypeNameInformation
procentropyStatistics → Entropy

entropy

2.0Yeti

Module: evovisxml-0.1
© David Nečas (Yeti) 2020

Description: Imports Evovis XML data files.

Functions:
TypeNameInformation
fileevovisxmlEvovis XML data files (.xml)

evovisxml

0.1Yeti

Module: extend-2.0
© David Nečas (Yeti) 2012

Description: Extends image by adding borders.

Functions:
TypeNameInformation
procextendBasic Operations → Extend

extend

2.0Yeti

Module: extract_path-2.0
© David Nečas (Yeti) 2016

Description: Extracts coordinates and tangents along a path selection.

Functions:
TypeNameInformation
procextract_pathDistortion → Extract Path Selection

extract_path

2.0Yeti

Module: ezdfile-0.9
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Nanosurf EZD and NID data files.

Functions:
TypeNameInformation
fileezdfileNanosurf files (.ezd, .nid)

ezdfile

0.9Yeti

Module: facet-level-3.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Automatic facet-orientation based leveling. Levels data to make facets point up.

Functions:
TypeNameInformation
procfacet-levelLevel → Facet Level

facet-level

3.0Yeti

Module: facet_analysis-3.0
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Visualizes, marks and measures facet orientation.

Functions:
TypeNameInformation
procfacet_analysisMeasure Features → Facet Analysis

facet_analysis

3.0Yeti

Module: facet_measure-2.2
© David Nečas (Yeti) 2019

Description: Visualizes, marks and measures facet orientation.

Functions:
TypeNameInformation
procfacet_measureMeasure Features → Facet Measurement

facet_measure

2.2Yeti

Module: fbm_synth-2.0
© David Nečas (Yeti) 2014

Description: Generates random surfaces similar to fractional Brownian motion.

Functions:
TypeNameInformation
procfbm_synthSynthetic → Noise → Brownian

fbm_synth

2.0Yeti

Module: femtoscan-1.0
© David Nečas (Yeti) 2014

Description: Imports FemtoScan SPM data files.

Functions:
TypeNameInformation
filefemtoscanFemtoScan SPM files

femtoscan

1.0Yeti

Module: femtoscan-txt-0.1
© David Nečas (Yeti) 2014

Description: Imports FemtoScan TXT files.

Functions:
TypeNameInformation
filefemtoscan-txtFemtoScan text files (.txt)

femtoscan-txt

0.1Yeti

Module: fft-3.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Two-dimensional FFT (Fast Fourier Transform).

Functions:
TypeNameInformation
procfftIntegral Transforms → 2D FFT

fft

3.0Petr Klapetek

Module: fft_filter_1d-3.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: FFT filtering

Functions:
TypeNameInformation
procfft_filter_1dCorrect Data → 1D FFT Filtering

fft_filter_1d

3.0Petr Klapetek

Module: fft_filter_2d-1.12
© Chris Anderson, Molecular Imaging Corp. 2005

Description: 2D FFT Filtering

Functions:
TypeNameInformation
procfft_filter_2dCorrect Data → 2D FFT Filtering

fft_filter_2d

1.12Chris Anderson

Module: fft_synth-2.0
© David Nečas (Yeti) 2009

Description: Generates random surfaces using spectral synthesis.

Functions:
TypeNameInformation
procfft_synthSynthetic → Noise → Spectral

fft_synth

2.0Yeti

Module: fibre_synth-2.0
© David Nečas (Yeti) 2017

Description: Generates surfaces composed from randomly placed fibers.

Functions:
TypeNameInformation
procfibre_synthSynthetic → Deposition → Fibers

fibre_synth

2.0Yeti

Module: filter-4.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Filter tool, processes selected part of data with a filter (conservative denoise, mean, median, Kuwahara, minimum, maximum).

Functions:
TypeNameInformation
toolGwyToolFilterBasic filters: mean, median, denoise, …

filter

4.0Petr Klapetek

Module: fit-shape-2.2
© David Nečas (Yeti) 2016

Description: Fits predefined geometrical shapes to data.

Functions:
TypeNameInformation
procfit_shapeMeasure Features → Fit Shape
xyzxyz_fit_shape

fit-shape

2.2Yeti

Module: fitsfile-1.0
© David Nečas (Yeti) 2014

Description: Reads Flexible Image Transport System (FITS) files.

Functions:
TypeNameInformation
filefitsfileFlexible Image Transport System FITS (.fits)

fitsfile

1.0Yeti

Module: flatten_base-1.1
© David Nečas (Yeti) 2014

Description: Levels the flat base of a surface with positive features.

Functions:
TypeNameInformation
procflatten_baseLevel → Flatten Base

flatten_base

1.1Yeti

Module: formats3d-2.1
© David Nečas (Yeti) 2020

Description: Exports images as miscellaneous 3D data formats and imports XYZ points from 3D formats.

Functions:
TypeNameInformation
filevtk3dVTK structured grid (.vtk)
fileply3dPolygon file format (.ply)
fileobj3dWavefront geometry definition (.obj)
fileoff3dObject File Format (.off)
filestl3dStereolitography STL (.stl)
filerawxyzXYZ data files (.xyz)

formats3d

2.1Yeti

Module: fraccor-1.3
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Removes data under mask using fractal interpolation.

Functions:
TypeNameInformation
procfraccorCorrect Data → Fractal Correction

fraccor

1.3Petr Klapetek

Module: fractal-3.0
© David Nečas (Yeti) & Petr Klapetek & Jindřich Bílek 2004

Description: Calculates fractal dimension using several methods (partitioning, box counting, triangulation, power spectrum).

Functions:
TypeNameInformation
procfractalStatistics → Fractal Dimension

fractal

3.0Jindřich Bilek & Petr Klapetek

Module: freq_split-2.0
© David Nečas (Yeti) 2018

Description: Splits image into low and high frequency components.

Functions:
TypeNameInformation
procfreq_splitLevel → Frequency Split

freq_split

2.0Yeti

Module: gaussian_step-2.0
© David Nečas (Yeti) & Petr Klapetek 2019

Description: Edge detection using a Gaussian step filter.

Functions:
TypeNameInformation
procgaussian_stepPresentation → Edge Detection → Gaussian Step

gaussian_step

2.0Yeti

Module: gdeffile-0.4
© David Nečas (Yeti) 2010

Description: Imports DME GDEF data files.

Functions:
TypeNameInformation
filegdeffileDME GDEF files (.gdf)

gdeffile

0.4Yeti

Module: good_profile-2.0
© David Nečas (Yeti) 2020

Description: Calculates good average row from one or multiple images of repeated scanning of the same feature.

Functions:
TypeNameInformation
procgood_profileCorrect Data → Good Mean Profile

good_profile

2.0Yeti

Module: gradient-1.6
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Creates presentations with various gradients (Sobel, Prewitt).

Functions:
TypeNameInformation
procsobel_horizontalPresentation → Gradient → Sobel (horizontal)
procsobel_verticalPresentation → Gradient → Sobel (vertical)
procprewitt_horizontalPresentation → Gradient → Prewitt (horizontal)
procprewitt_verticalPresentation → Gradient → Prewitt (vertical)
procazimuthPresentation → Gradient → Azimuth

gradient

1.6Petr Klapetek

Module: grain_cross-4.0
© David Nečas 2007

Description: Plots one grain quantity as a function of another.

Functions:
TypeNameInformation
procgrain_crossGrains → Correlate

grain_cross

4.0Yeti

Module: grain_dist-5.0
© David Nečas (Yeti) & Petr Klapetek & Sven Neumann 2003

Description: Evaluates distribution of grains (continuous parts of mask).

Functions:
TypeNameInformation
procgrain_distGrains → Distributions

grain_dist

5.0Petr Klapetek, Sven Neumann, Yeti

Module: grain_edge-0.6
© David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2011

Description: Marks grains by edge detection method.

Functions:
TypeNameInformation
procgrain_edgeGrains → Mark by Edge Detection

grain_edge

0.6Daniil Bratashov

Module: grain_filter-1.2
© David Nečas (Yeti) 2014

Description: Filters grains by their properties, using logical expressions and thresholds.

Functions:
TypeNameInformation
procgrain_filterGrains → Filter

grain_filter

1.2Yeti

Module: grain_makesel-1.0
© David Nečas (Yeti) 2015

Description: Creates selections visualizing grains.

Functions:
TypeNameInformation
procgrain_inscribe_discsGrains → Select Inscribed Discs
procgrain_exscribe_circlesGrains → Select Circumscribed Circles
procgrain_inscribe_rectsGrains → Select Inscribed Rectangles
procgrain_exscribe_bboxesGrains → Select Bounding Boxes

grain_makesel

1.0Yeti

Module: grain_mark-2.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Marks grains by thresholding (height, slope, curvature).

Functions:
TypeNameInformation
procgrain_markGrains → Mark by Threshold

grain_mark

2.0Petr Klapetek

Module: grain_stat-2.0
© David Nečas (Yeti) & Petr Klapetek & Sven Neumann 2015

Description: Calculates statistics for all grain quantities.

Functions:
TypeNameInformation
procgrain_statGrains → Statistics

grain_stat

2.0Petr Klapetek, Sven Neumann, Yeti

Module: grain_summary-2.0
© David Nečas (Yeti) & Petr Klapetek & Sven Neumann 2015

Description: Displays overall grain statistics.

Functions:
TypeNameInformation
procgrain_summaryGrains → Summary

grain_summary

2.0Petr Klapetek, Sven Neumann, Yeti

Module: grain_wshed-2.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Marks grains by watershed algorithm.

Functions:
TypeNameInformation
procgrain_wshedGrains → Mark by Watershed

grain_wshed

2.0Petr Klapetek

Module: grainmeasure-2.0
© David Nečas (Yeti) 2007

Description: Grain measurement tool, calculates characteristics of selected continuous parts of mask.

Functions:
TypeNameInformation
toolGwyToolGrainMeasureMeasure individual grains (continuous parts of mask)

grainmeasure

2.0Yeti

Module: grainremover-4.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Grain removal tool, removes continuous parts of mask and/or underlying data.

Functions:
TypeNameInformation
toolGwyToolGrainRemoverRemove individual grains (continuous parts of mask)

grainremover

4.0Petr Klapetek, Yeti

Module: graph_align-1.3
© David Nečas (Yeti) 2015

Description: Aligns graph curves.

Functions:
TypeNameInformation
graphgraph_alignCorrect Data → Align

graph_align

1.3Yeti

Module: graph_cd-2.5
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Critical dimension measurements

Functions:
TypeNameInformation
graphgraph_cdMeasure Features → Critical Dimension

graph_cd

2.5Petr Klapetek

Module: graph_cut-2.0
© David Nečas (Yeti) & Petr Klapetek 2007

Description: Cut graph

Functions:
TypeNameInformation
graphgraph_cutBasic Operations → Cut

graph_cut

2.0Petr Klapetek

Module: graph_dos_spectrum-0.2
© David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2010

Description: DOS Spectrum

Functions:
TypeNameInformation
graphdos_spectrumMeasure Features → DOS Spectrum

graph_dos_spectrum

0.2Daniil Bratashov

Module: graph_export_ascii-3.0
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Exports graph data to text files.

Functions:
TypeNameInformation
graphgraph_export_asciiExport → Text

graph_export_ascii

3.0Petr Klapetek

Module: graph_export_bitmap-2.1
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Export graph into bitmap

Functions:
TypeNameInformation
graphgraph_export_bitmapExport → Bitmap

graph_export_bitmap

2.1Petr Klapetek

Module: graph_export_vector-2.0
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Exports graphs to PostScript

Functions:
TypeNameInformation
graphgraph_export_vectorExport → PostScript

graph_export_vector

2.0Petr Klapetek

Module: graph_fdfit-1.6
© David Nečas (Yeti) & Petr Klapetek 2007

Description: Fit force-distance data

Functions:
TypeNameInformation
graphgraph_fdfitForce Distance → Fit FD Curve

graph_fdfit

1.6Petr Klapetek

Module: graph_filter-0.4
© David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov (dn2010) 2012

Description: Remove graph noise by filtering.

Functions:
TypeNameInformation
graphgraph_filterCorrect Data → Filter

graph_filter

0.4Daniil Bratashov

Module: graph_fit-2.11
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Fit graph with function

Functions:
TypeNameInformation
graphgraph_fitMeasure Features → Fit Function

graph_fit

2.11Petr Klapetek

Module: graph_flip-1.0
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Flip graph along the y axis.

Functions:
TypeNameInformation
graphgraph_flipBasic Operations → Flip

graph_flip

1.0Petr Klapetek

Module: graph_fztofd-1.0
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Convert FZ to FD curve

Functions:
TypeNameInformation
graphgraph_fztofdForce Distance → FZ to FD Curve

graph_fztofd

1.0Petr Klapetek

Module: graph_invert-1.0
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Invert graph.

Functions:
TypeNameInformation
graphgraph_invertBasic Operations → Invert

graph_invert

1.0Petr Klapetek

Module: graph_level-1.5
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Level graph by line.

Functions:
TypeNameInformation
graphgraph_levelCorrect Data → Level

graph_level

1.5Petr Klapetek

Module: graph_logscale-2.0
© David Nečas (Yeti) 2016

Description: Physically transforms graph data to logarithmic scale.

Functions:
TypeNameInformation
graphgraph_logscaleCorrect Data → Logscale Transform

graph_logscale

2.0Yeti

Module: graph_measure_period-1.0
© David Nečas (Yeti) 2023

Description: Evaluates the period of a one-dimensional periodic structure.

Functions:
TypeNameInformation
graphgraph_measure_periodMeasure Features → Period

graph_measure_period

1.0Yeti

Module: graph_merge-1.0
© David Nečas (Yeti) 2023

Description: Merges and averages graph curves.

Functions:
TypeNameInformation
graphgraph_mergeCorrect Data → Merge Curves
graphgraph_averageCorrect Data → Average Curves

graph_merge

1.0Yeti

Module: graph_peaks-2.0
© David Nečas (Yeti) 2016

Description: Finds peaks on graph curves.

Functions:
TypeNameInformation
graphgraph_peaksMeasure Features → Find Peaks

graph_peaks

2.0Yeti

Module: graph_polylevel-1.1
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Remove polynomial background

Functions:
TypeNameInformation
graphgraph_polylevelForce Distance → Remove Polynomial Background

graph_polylevel

1.1Petr Klapetek

Module: graph_sfuncs-2.0
© David Nečas (Yeti) 2019

Description: Calculates one-dimensional statistical functions (height distribution, correlations, PSDF).

Functions:
TypeNameInformation
graphgraph_sfuncsStatistics → Statistical Functions

graph_sfuncs

2.0Yeti

Module: graph_simplemech-1.0
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Get simple mechanical quantities

Functions:
TypeNameInformation
graphgraph_simplemechForce Distance → Nanomechanical Fit

graph_simplemech

1.0Petr Klapetek

Module: graph_sinebg-1.1
© David Nečas (Yeti) & Petr Klapetek 2021

Description: Remove sine background

Functions:
TypeNameInformation
graphgraph_sinebgForce Distance → Remove Sine Background

graph_sinebg

1.1Petr Klapetek

Module: graph_stats-3.1
© David Nečas (Yeti) 2017

Description: Calculates simple graph curve statistics.

Functions:
TypeNameInformation
graphgraph_statsStatistics → Statistical Quantities

graph_stats

3.1Yeti

Module: graph_terraces-2.1
© David Nečas (Yeti) 2019

Description: Fits terraces with polynomial background.

Functions:
TypeNameInformation
graphgraph_terracesMeasure Features → Terraces

graph_terraces

2.1Yeti

Module: gsffile-1.3
© David Nečas (Yeti) 2010

Description: Reads and exports Gwyddion Simple Field files.

Functions:
TypeNameInformation
filegsffileGwyddion Simple Field (.gsf)

gsffile

1.3Yeti

Module: gwyfile-0.18
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Loads and saves Gwyddion native data files (serialized objects).

Functions:
TypeNameInformation
filegwyfileGwyddion native format (.gwy)

gwyfile

0.18Yeti

Module: gxyzffile-2.1
© David Nečas (Yeti) 2013

Description: Imports Gwyddion XYZ field files.

Functions:
TypeNameInformation
filegxyzfileGwyXYZ data files

gxyzffile

2.1Yeti

Module: hdf4file-0.8
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Hierarchical Data Format (HDF) files, version 4.

Functions:
TypeNameInformation
filepsifilePsi HDF4 files (.hdf)

hdf4file

0.8Yeti

Module: hdf5file-1.3
© David Nečas (Yeti) & Petr Klapetek 2020

Description: Imports files based on Hierarchical Data Format (HDF), version 5.

Functions:
TypeNameInformation
filehdf5genericGeneric HDF5 files (.h5)
filemat7xfileMatlab 7.x HDF5 MAT files (.mat)
fileergofileAsylum Research Ergo HDF5 files (.h5)
fileshilpsfileShilps Sciences Lucent HDF5 files (.h5)

hdf5file

1.3Yeti

Module: hdrimage-3.4
© David Nečas (Yeti) 2011

Description: Imports 16bit grayscale PPM, PNG and TIFF images, imports and exports OpenEXR images (if available).

Functions:
TypeNameInformation
fileopenexrOpenEXR images (.exr)
filepng16PNG images with 16bit depth (.png)
filepgm16PGM images with 16bit depth (.pgm)
filetiffbigTIFF and BigTIFF images with high depth (.tiff)

hdrimage

3.4Yeti

Module: hertz-0.2
© Anna Charvatova Campbell 2017

Description: Calculates the apparent Young's modulus of a rough surface according to Hertzian contact theory.

Functions:
TypeNameInformation
prochertz_modulusSPM Modes → Force and Indentation → Hertz contact

hertz

0.2Anna Charvatova Campbell

Module: hitachi-afm-0.7
© David Nečas (Yeti) & Petr Klapetek & Markus Pristovsek 2005

Description: Imports Hitachi AFM files.

Functions:
TypeNameInformation
filehitachi-afmHitachi AFM files (.afm)
filehitachi-afm-oldHitachi AFM files, old (.afm)

hitachi-afm

0.7Yeti

Module: hitachi-sem-0.2
© David Nečas (Yeti) 2011

Description: Imports Hitachi S-3700 and S-4800 SEM files.

Functions:
TypeNameInformation
filehitachi-semHitachi SEM files (.txt + image)

hitachi-sem

0.2Yeti

Module: hough-2.0
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Hough transform.

Functions:
TypeNameInformation
prochoughIntegral Transforms → Hough

hough

2.0Petr Klapetek

Module: icolorange-4.2
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Interactive color range tool, allows selecting the data range false color scale should map to, either on data or on height distribution histogram.

Functions:
TypeNameInformation
toolGwyToolColorRangeStretch color range to part of data

icolorange

4.2Yeti

Module: igorfile-0.13
© David Nečas (Yeti) 2009

Description: Imports Igor binary waves (.ibw).

Functions:
TypeNameInformation
fileigorfileIgor binary waves (.ibw)

igorfile

0.13Yeti

Module: imgexport-3.1
© David Nečas (Yeti) 2014

Description: Renders data into vector (SVG, PDF, EPS) and pixmap (PNG, JPEG, TIFF, WebP, PPM, BMP, TARGA) images. Export to some formats relies on GDK and other libraries thus may be installation-dependent.

Functions:
TypeNameInformation
filepngcairoPortable Network Graphics (.png)
filejpegcairoJPEG (.jpeg,.jpg)
filetiffcairoTIFF (.tiff,.tif)
filepnmcairoPortable Pixmap (.ppm,.pnm)
filebmpcairoWindows or OS2 Bitmap (.bmp)
filetgacairoTARGA (.tga,.targa)
filewebpcairoWebP (.webp)
filejxlcairoJPEG XL (.jxl)
filepdfcairoPortable document format (.pdf)
fileepscairoEncapsulated PostScript (.eps)
filesvgcairoScalable Vector Graphics (.svg)

imgexport

3.1Yeti

Module: immerse-3.0
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Immerse high resolution detail into overall image.

Functions:
TypeNameInformation
procimmerseMultidata → Immerse Detail

immerse

3.0Petr Klapetek

Module: indent_analyze-1.0
© Lukáš Chvátal 2005

Description: Analyses nanoindentation structure (volumes, surfaces, ...).

Functions:
TypeNameInformation
procindent_analyzeSPM Modes → Force and Indentation → Analyze Imprint

indent_analyze

1.0Lukáš Chvátal & Yeti

Module: intelliwave-0.1
© David Nečas (Yeti) 2016

Description: Imports IntelliWave interferometric ESD data.

Functions:
TypeNameInformation
fileintelliwaveIntelliWave interferometric data (.esd)

intelliwave

0.1Yeti

Module: intematix-0.4
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Intematix SDF data files.

Functions:
TypeNameInformation
fileintematixIntematix SDF data files (.sdf)

intematix

0.4Yeti

Module: iso28600-0.4
© David Nečas (Yeti) 2011

Description: Imports and exports ISO 28600:2011 SPM data transfer format.

Functions:
TypeNameInformation
fileiso28600ISO 28600:2011 SPM data transfer files (.spm)

iso28600

0.4Yeti

Module: jeol-0.8
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports JEOL data files.

Functions:
TypeNameInformation
filejeolJEOL data files (.tif)

jeol

0.8Yeti

Module: jeoltem-0.1
© David Nečas (Yeti) 2021

Description: Imports JEOL TEM images.

Functions:
TypeNameInformation
filejeol-temJEOL TIF TEM image (.tif)

jeoltem

0.1Yeti

Module: jpkscan-0.16
© JPK Instruments AG, David Nečas (Yeti) 2005-2007

Description: Imports JPK image scans.

Functions:
TypeNameInformation
filejpkscanJPK image scans (.jpk, .jpk-qi-image)
filejpkforceJPK force curves (.jpk-force, .jpk-force-map, .jpk-qi-data)

jpkscan

0.16Sven Neumann, Yeti

Module: jspmfile-0.2
© David Nečas (Yeti) 2014

Description: Imports JEOL JSPM data files.

Functions:
TypeNameInformation
filejspmfileJEOL JSPM data files (.tif)

jspmfile

0.2Yeti

Module: keyence-2.3
© David Nečas (Yeti) 2015

Description: Imports Keyence VK3, VK4, VK6 and VK7 files.

Functions:
TypeNameInformation
filekeyence3Keyence VK3 data files (.vk3)
filekeyence4Keyence VK4 data files (.vk4)
filekeyence6Keyence VK6 data files (.vk6)
filekeyence7Keyence VK7 data files (.vk7)

keyence

2.3Yeti

Module: laplace-2.1
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Removes data under mask, interpolating them with Laplace equation solution.

Functions:
TypeNameInformation
proclaplaceCorrect Data → Interpolate Data Under Mask
proczeromaskedCorrect Data → Zero Data Under Mask

laplace

2.1Petr Klapetek

Module: lat_synth-2.0
© David Nečas (Yeti) 2014

Description: Generates surfaces based on regular or random lattices.

Functions:
TypeNameInformation
proclat_synthSynthetic → Lattice

lat_synth

2.0Yeti

Module: latsim-2.0
© David Nečas (Yeti) & Petr Klapetek 2012

Description: Lateral force simulator

Functions:
TypeNameInformation
proclatsimSPM Modes → Force and Indentation → Lateral Force

latsim

2.0Petr Klapetek

Module: lattice-1.2
© David Nečas (Yeti) & Petr Klapetek 2013

Description: Layer allowing selection of a two-dimensional lattice.

Functions:
TypeNameInformation
layerGwyLayerLattice

lattice

1.2Yeti

Module: leica-0.5
© Daniil Bratashov (dn2010), David Necas (Yeti) 2016

Description: Imports Leica CLSM image files (LIF).

Functions:
TypeNameInformation
fileleicaLeica LIF image files (.lif)

leica

0.5Daniil Bratashov

Module: level-3.1
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Levels data by simple plane subtraction or by rotation, and fixes minimal or mean value to zero.

Functions:
TypeNameInformation
proclevelLevel → Plane Level
proclevel_rotateLevel → Level Rotate
procfix_zeroLevel → Fix Zero
proczero_meanLevel → Zero Mean Value
proczero_maxLevel → Zero Maximum Value

level

3.1Yeti

Module: level3-3.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Three-point level tool, levels data by subtracting a plane fitted through three selected points.

Functions:
TypeNameInformation
toolGwyToolLevel3Level data by fitting a plane through three points

level3

3.0Yeti

Module: level_grains-2.0
© David Nečas (Yeti) 2011

Description: Levels individual grains, interpolating the shifts between using Laplacian interpolation.

Functions:
TypeNameInformation
proclevel_grainsGrains → Level Grains

level_grains

2.0David Nečas

Module: lextfile-0.6
© David Nečas (Yeti) & Petr Klapetek 2010

Description: Imports LEXT data files.

Functions:
TypeNameInformation
filelextOlympus LEXT OLS4000 (.lext)

lextfile

0.6Yeti

Module: line-3.8
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of arbitrary straight lines.

Functions:
TypeNameInformation
layerGwyLayerLine

line

3.8Yeti

Module: linecorrect-1.12
© David Nečas (Yeti) & Petr Klapetek & Luke Somers 2004

Description: Corrects line defects (mostly experimental algorithms).

Functions:
TypeNameInformation
procline_correct_stepCorrect Data → Step Line Correction
procline_correct_invertedCorrect Data → Mark Inverted Rows

linecorrect

1.12Yeti, Luke Somers

Module: linematch-2.0
© David Nečas (Yeti) 2015

Description: Aligns rows by various methods.

Functions:
TypeNameInformation
procalign_rowsCorrect Data → Align Rows

linematch

2.0Yeti

Module: linestats-3.1
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Row/column statistical function tool, mean values, medians, maxima, minima, RMS, ..., of rows or columns.

Functions:
TypeNameInformation
toolGwyToolLineStatsCalculate row/column statistical functions

linestats

3.1Yeti

Module: lno_synth-2.1
© David Nečas (Yeti) 2010

Description: Generates various kinds of line noise.

Functions:
TypeNameInformation
proclno_synthSynthetic → Noise → Line Noise

lno_synth

2.1Yeti

Module: local_contrast-2.0
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Maximizes local contrast.

Functions:
TypeNameInformation
proclocal_contrastPresentation → Local Contrast

local_contrast

2.0Yeti

Module: logistic-0.5
© David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2016

Description: Trains logistic regression to mark grains.

Functions:
TypeNameInformation
proclogistic_regressionGrains → Logistic Regression

logistic

0.5Daniil Bratashov

Module: magellan-1.2
© David Nečas (Yeti) 2013

Description: Imports FEI Magellan SEM images.

Functions:
TypeNameInformation
filemagellanFEI Magellan SEM image (.tif)

magellan

1.2Yeti

Module: mapvue-0.4
© David Nečas (Yeti) 2009

Description: Imports MapVue data files (.map).

Functions:
TypeNameInformation
filemapvueMapVue files (.map)

mapvue

0.4Yeti

Module: mark_disconn-2.0
© David Nečas (Yeti) 2015

Description: Creates mask of values disconnected to the rest.

Functions:
TypeNameInformation
procmark_disconnCorrect Data → Mask of Disconnected

mark_disconn

2.0Yeti

Module: mark_with-2.0
© David Nečas (Yeti) 2009

Description: Creates or modifies a mask using other channels.

Functions:
TypeNameInformation
procmark_withMask → Mark With

mark_with

2.0Yeti

Module: mask_distribute-2.0
© David Nečas (Yeti) 2015

Description: Distributes masks to other channels.

Functions:
TypeNameInformation
procmask_distributeMask → Distribute

mask_distribute

2.0Yeti

Module: mask_edt-3.0
© David Nečas (Yeti) 2014

Description: Performs simple and true Euclidean distance transforms of masks.

Functions:
TypeNameInformation
procmask_edtMask → Distance Transform

mask_edt

3.0Yeti

Module: mask_morph-2.0
© David Nečas (Yeti) 2015

Description: Performs basic morphological operations with masks.

Functions:
TypeNameInformation
procmask_morphMask → Morphological Operation

mask_morph

2.0Yeti

Module: mask_noisify-2.0
© David Nečas (Yeti) 2017

Description: Adds salt and/or pepper noise to mask.

Functions:
TypeNameInformation
procmask_noisifyMask → Noisify

mask_noisify

2.0Yeti

Module: mask_shift-2.0
© David Nečas (Yeti) 2020

Description: Shift mask with respect to the image.

Functions:
TypeNameInformation
procmask_shiftMask → Shift

mask_shift

2.0Yeti

Module: maskcor-3.1
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Searches for a detail in another image using correlation.

Functions:
TypeNameInformation
procmaskcorMultidata → Correlation Search

maskcor

3.1Petr Klapetek, Yeti

Module: maskedit-4.2
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Mask editor tool, allows interactive modification of parts of the mask.

Functions:
TypeNameInformation
toolGwyToolMaskEditorEdit mask

maskedit

4.2Yeti

Module: maskops-1.7
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Basic operations with mask: inversion, removal, extraction.

Functions:
TypeNameInformation
procmask_removeMask → Remove Mask
procmask_invertMask → Invert Mask
procmask_extractMask → Extract Mask
procgrain_extract_numbersGrains → Extract Numbers
procgrain_rem_touchingGrains → Remove Edge-Touching
procmask_thinMask → Thin

maskops

1.7Yeti

Module: matfile-0.2
© David Nečas (Yeti) 2009

Description: Imports Matlab MAT files v5.

Functions:
TypeNameInformation
filemat5fileMatlab MAT 5 file (.mat)

matfile

0.2Yeti

Module: mcrop-0.5
© David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2010

Description: Crops non-intersecting regions of two images.

Functions:
TypeNameInformation
procmcropMultidata → Mutual Crop

mcrop

0.5Daniil Bratashov

Module: measure_lattice-3.5
© David Nečas (Yeti) 2015

Description: Measures parameters of two-dimensional lattices.

Functions:
TypeNameInformation
procmeasure_latticeMeasure Features → Lattice

measure_lattice

3.5Yeti

Module: median-bg-2.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts background using a rank-based algorithm.

Functions:
TypeNameInformation
procmedian-bgLevel → Median Level

median-bg

2.0Yeti

Module: merge-4.0
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Merges two images.

Functions:
TypeNameInformation
procmergeMultidata → Merge

merge

4.0Petr Klapetek, Yeti

Module: metropro-1.3
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports binary MetroPro (Zygo) data files.

Functions:
TypeNameInformation
filemetroproMetroPro files (.dat)

metropro

1.3Yeti

Module: mfm_current-2.0
© David Nečas (Yeti) & Petr Klapetek 2017

Description: Simulation of current line magnetic field

Functions:
TypeNameInformation
procmfm_currentSPM Modes → Magnetic → Current Line Field

mfm_current

2.0Petr Klapetek

Module: mfm_field-2.0
© David Nečas (Yeti) & Petr Klapetek 2017

Description: Simulation of magnetic field above perpendicular media

Functions:
TypeNameInformation
procmfm_fieldSPM Modes → Magnetic → Perpendicular Media Field

mfm_field

2.0Petr Klapetek

Module: mfm_findshift-1.3
© David Nečas (Yeti) & Petr Klapetek 2017

Description: Lift height difference estimation from data blur

Functions:
TypeNameInformation
procmfm_findshiftSPM Modes → Magnetic → Estimate Shift in Z

mfm_findshift

1.3Petr Klapetek

Module: mfm_parallel-2.0
© David Nečas (Yeti) & Petr Klapetek 2017

Description: Simulation of parallel magnetic media

Functions:
TypeNameInformation
procmfm_parallelSPM Modes → Magnetic → Parallel Media Field

mfm_parallel

2.0Petr Klapetek

Module: mfm_recalc-2.0
© David Nečas (Yeti) & Petr Klapetek 2018

Description: Converts the MFM data to force gradient.

Functions:
TypeNameInformation
procmfm_recalcSPM Modes → Magnetic → Recalculate to Force Gradient

mfm_recalc

2.0Petr Klapetek, Robb Puttock

Module: mfm_shift-2.1
© David Nečas (Yeti) & Petr Klapetek 2017

Description: Simulation of magnetic field z component change for another level

Functions:
TypeNameInformation
procmfm_shiftSPM Modes → Magnetic → Field Shift in Z

mfm_shift

2.1Petr Klapetek

Module: microprof-1.1
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports MicroProf FRT profilometer data files.

Functions:
TypeNameInformation
filemicroprofMicroProf FRT files (.frt)
filemicroprof_txtMicroProf FRT text files (.txt)

microprof

1.1Yeti

Module: miffile-0.3
© David Nečas (Yeti) 2010

Description: Imports DME MIF data files.

Functions:
TypeNameInformation
filemiffileDME MIF files (.mif)

miffile

0.3Yeti

Module: mifile-0.18
© Chris Anderson, Molecular Imaging Corp. 2006

Description: Imports Molecular Imaging MI data files.

Functions:
TypeNameInformation
filemifilePicoView Data Files (.mi)

mifile

0.18Chris Anderson

Module: mulfile-0.2
© David Nečas (Yeti) 2011

Description: Imports Aarhus MUL files.

Functions:
TypeNameInformation
filemulfileAarhus MUL files (.mul)

mulfile

0.2Yeti

Module: multiprofile-1.1
© David Nečas (Yeti) 2020

Description: Displays and extracts scan line graphs from multiple images simultaneously.

Functions:
TypeNameInformation
procmultiprofileMultidata → Multiprofile

multiprofile

1.1Yeti

Module: nanoeducator-0.6
© David Nečas (Yeti) 2009

Description: Imports Nanoeducator data files.

Functions:
TypeNameInformation
filenanoeducatorNanoeducator files (.mspm, .spm, .stm)

nanoeducator

0.6Yeti

Module: nanomagnetics-1.2
© Sameer Grover, Tata Institute of Fundamental Research 2012

Description: Imports Nanomagnetics' NMI file format version 3 and 5

Functions:
TypeNameInformation
filenanomagneticsNanomagnetics File (.nmi)

nanomagnetics

1.2Sameer Grover

Module: nanonics-0.5
© David Nečas (Yeti) 2009

Description: Imports Nanonics NAN data files.

Functions:
TypeNameInformation
filenanonicsNanonics files (.nan)

nanonics

0.5Yeti

Module: nanonis-1.4
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Nanonis SXM data files.

Functions:
TypeNameInformation
filenanonisNanonis SXM files (.sxm)

nanonis

1.4Yeti

Module: nanonis-spec-1.3
© David Nečas (Yeti) 2018

Description: Imports Nanonis DAT spectrum files.

Functions:
TypeNameInformation
filenanonis_specNanonis spectrum files (.dat)

nanonis-spec

1.3Yeti

Module: nanoobserver-2.3
© David Nečas (Yeti) 2012

Description: Reads Nano-Solution/NanoObserver .nao files.

Functions:
TypeNameInformation
filenanoobserverNano-Solution → NanoObserver data (.nao)

nanoobserver

2.3Yeti

Module: nanoscan-0.9
© David Nečas (Yeti) 2009

Description: Imports NanoScan XML files.

Functions:
TypeNameInformation
filenanoscanNanoScan XML files (.xml)

nanoscan

0.9Yeti

Module: nanoscantech-0.16
© David Nečas (Yeti), Daniil Bratashov (dn2010), Antony Kikaxa 2012

Description: Imports NanoScanTech .nstdat files.

Functions:
TypeNameInformation
filenanoscantechNanoScanTech data (.nstdat)

nanoscantech

0.16Daniil Bratashov (dn2010@gmail.com)

Module: nanoscope-0.49
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Imports Bruker Nanoscope data files, version 3 or newer.

Functions:
TypeNameInformation
filenanoscopeNanoscope III files

nanoscope

0.49Yeti

Module: nanoscope-ii-0.3
© David Nečas (Yeti) & Petr Klapetek 2007

Description: Imports Digital Instruments Nanoscope II data files.

Functions:
TypeNameInformation
filenanoscope-iiNanoscope II files

nanoscope-ii

0.3Yeti

Module: nanosystemz-0.1
© David Nečas (Yeti) 2018

Description: Imports NanoSystem profilometry data files.

Functions:
TypeNameInformation
filenanosystemzNanoSystem profilometry files (.spm)

nanosystemz

0.1Yeti

Module: nanotop-1.9
© Alexander Kovalev, Metal-Polymer Research Institute 2006

Description: Imports NANOTOP AFM files

Functions:
TypeNameInformation
filenanotopNanotop files (.spm)

nanotop

1.9Alexander Kovalev

Module: netcdf-0.10
© David Nečas (Yeti), Petr Klapetek & Niv Levy 2006

Description: Imports network Common Data Form (netCDF) files created by GXSM.

Functions:
TypeNameInformation
filegsxmfileGSXM netCDF files (.nc)

netcdf

0.10Yeti

Module: neural-2.4
© David Nečas (Yeti) & Petr Klapetek 2012

Description: Neural network SPM data processing

Functions:
TypeNameInformation
procneural_trainMultidata → Neural Network Training
procneural_applyMultidata → Apply Neural Network

neural

2.4Petr Klapetek

Module: nmmxyz-2.1
© David Nečas (Yeti) 2016

Description: Imports Nano Measuring Machine profile files.

Functions:
TypeNameInformation
filenmmxyzNano Measuring Machine files (*.dsc)

nmmxyz

2.1Yeti

Module: noise_synth-2.0
© David Nečas (Yeti) 2010

Description: Generates uncorrelated random noise.

Functions:
TypeNameInformation
procnoise_synthSynthetic → Noise → Noise

noise_synth

2.0Yeti

Module: nova-asc-0.1
© David Nečas (Yeti) 2022

Description: Imports Nova ASC files.

Functions:
TypeNameInformation
filenova-ascNova ASCII files (.txt)

nova-asc

0.1Yeti

Module: npyfile-1.0
© David Nečas (Yeti) 2023

Description: Imports and exports binary serialized numpy arrays (NPY, NPZ).

Functions:
TypeNameInformation
filenpyfileSerialized numpy array (.npy)
filenpzfileMultiple serialized numpy arrays (.npz)

npyfile

1.0Yeti

Module: nrrdfile-0.9
© David Nečas (Yeti) 2011

Description: Imports and exports nearly raw raster data (NRRD) files.

Functions:
TypeNameInformation
filenrrdfileNearly raw raster data (NRRD) files (.nrrd)

nrrdfile

0.9Yeti

Module: nt-mdt-0.25
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Imports NT-MDT data files.

Functions:
TypeNameInformation
filent-mdtNT-MDT files (.mdt)

nt-mdt

0.25Yeti

Module: nxiifile-1.0
© David Nečas (Yeti) 2014

Description: Imports EM4SYS data files.

Functions:
TypeNameInformation
filenxiifileEM4SYS NX II files (.bmp)

nxiifile

1.0Yeti

Module: obj_synth-2.1
© David Nečas (Yeti) 2009

Description: Generates randomly patterned surfaces by placing objects.

Functions:
TypeNameInformation
procobj_synthSynthetic → Deposition → Objects

obj_synth

2.1Yeti

Module: oirfile-0.8
© David Nečas (Yeti) 2019

Description: Imports Olympus OIR data files.

Functions:
TypeNameInformation
fileoirfileOlympus OIR data files (.oir)
filepoirfileOlympus packed OIR data files (.poir)

oirfile

0.8Yeti

Module: oldmda-0.4
© David Nečas (Yeti) & Daniil Bratashov (dn2010) 2012

Description: Imports old NTMDT MDA Spectra files.

Functions:
TypeNameInformation
fileoldmdaNTMDT old MDA Spectra data (.sxml .dat)

oldmda

0.4dn2010

Module: ols-0.11
© David Nečas (Yeti) & Petr Klapetek 2008

Description: Imports OLS data files.

Functions:
TypeNameInformation
fileolsOlympus LEXT OLS3000 (.ols)

ols

0.11Jan Hořák, Yeti

Module: ometiff-1.1
© David Nečas (Yeti) 2013

Description: Imports OME-TIFF data files.

Functions:
TypeNameInformation
fileometiffOpen Microscopy OME-TIFF (.ome.tiff)

ometiff

1.1Yeti

Module: omicron-0.14
© David Nečas (Yeti) & Petr Klapetek & Markus Pristovsek 2006

Description: Imports Omicron data files (two-part .par + .tf*, .tb*, .sf*, .sb*).

Functions:
TypeNameInformation
fileomicronOmicron files (.par + data)

omicron

0.14Yeti

Module: omicronflat-2.5
© David Nečas (Yeti) 2015

Description: Imports Omicron flat files.

Functions:
TypeNameInformation
fileomicronflatOmicron flat files (*.*flat)

omicronflat

2.5Yeti

Module: omicronmatrix-0.90
© Philipp Rahe 2008

Description: Omicron MATRIX (param.mtrx & data.mtrx)

Functions:
TypeNameInformation
fileomicronmatrixOmicron MATRIX (.mtrx & .mtrx)

omicronmatrix

0.90Philipp Rahe

Module: opdfile-0.12
© David Nečas (Yeti) 2008

Description: Imports Wyko OPD and ASC files.

Functions:
TypeNameInformation
fileopdfileWyko OPD files (.opd)
fileopdfile-ascWyko ASCII export files (.asc)

opdfile

0.12Yeti

Module: opengps-1.4
© David Nečas (Yeti) 2014

Description: Reads ISO 5436-2 OpenGPS .x3p files.

Functions:
TypeNameInformation
fileopengpsISO 5436-2 OpenGPS data (.x3p)

opengps

1.4Yeti

Module: otsu_threshold-1.2
© Brazilian Nanotechnology National Laboratory 2013

Description: Automated threshold using Otsu's method on heights.

Functions:
TypeNameInformation
procotsu-thresholdGrains → Mark by Otsu's

otsu_threshold

1.2Vinicius Barboza

Module: outliers-1.5
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Creates mask of outliers.

Functions:
TypeNameInformation
procoutliersCorrect Data → Mask of Outliers

outliers

1.5Petr Klapetek

Module: pat_synth-3.1
© David Nečas (Yeti) 2010

Description: Generates surfaces representing simple patterns (staircase, amphitheater, grating, holes and pillars, ...).

Functions:
TypeNameInformation
procpat_synthSynthetic → Pattern

pat_synth

3.1Yeti

Module: path-1.2
© David Nečas (Yeti) 2016

Description: Layer allowing selection of a single long curve.

Functions:
TypeNameInformation
layerGwyLayerPath

path

1.2Yeti

Module: pathlevel-2.0
© David Nečas (Yeti) 2007

Description: Path level tool, performs row leveling along on user-set lines.

Functions:
TypeNameInformation
toolGwyToolPathLevelLevel rows using intersections with given lines

pathlevel

2.0Yeti

Module: phase_synth-2.0
© David Nečas (Yeti) 2017

Description: Generates phase-separated structures.

Functions:
TypeNameInformation
procphase_synthSynthetic → Order and Disorder → Phases

phase_synth

2.0Yeti

Module: phoenix-1.0
© David Nečas (Yeti) 2018

Description: Imports AFM data files from NASA Phoenix Mars mission.

Functions:
TypeNameInformation
filephoenixAFM data from NASA Phoenix mission (.dat, .lbl + .tab)

phoenix

1.0Yeti

Module: pid-2.0
© David Nečas (Yeti) & Petr Klapetek 2012

Description: A simple PID simulator

Functions:
TypeNameInformation
procpidSPM Modes → Force and Indentation → PID Simulation

pid

2.0Petr Klapetek

Module: pileup_synth-2.0
© David Nečas (Yeti) 2017

Description: Generates randomly patterned surfaces by piling up geometrical shapes.

Functions:
TypeNameInformation
procpileup_synthSynthetic → Deposition → Pile Up

pileup_synth

2.0Yeti

Module: pixmap-10.2
© David Nečas (Yeti) 2004-2014

Description: Imports data from low-depth pixmap images (PNG, TIFF, JPEG, ...). The set of available formats depends on available GDK pixbuf loaders.

Functions:
TypeNameInformation
filepngPortable Network Graphics (.png)
filejpegJPEG (.jpeg,.jpg)
filebmpWindows or OS2 Bitmap (.bmp)
filegifGraphics Interchange Format GIF (.gif)
fileicnsApple icon (.icns)
filejxlJPEG XL (.jxl)
filepnmPortable Pixmap (.ppm,.pnm)
filetgaTARGA (.tga,.targa)
filetiffTIFF (.tiff,.tif)
filewebpWebP (.webp)
filexpmX Pixmap (.xpm)

pixmap

10.2Yeti

Module: plateau_synth-1.0
© David Nečas (Yeti) 2023

Description: Generates images with stacked plateau-like structures.

Functions:
TypeNameInformation
procplateau_synthSynthetic → Deposition → Plateaus

plateau_synth

1.0Yeti

Module: pltfile-0.2
© David Nečas (Yeti) 2009

Description: Imports Nanosurf PLT files.

Functions:
TypeNameInformation
filepltfileNanosurf PLT files (.plt)

pltfile

0.2Yeti

Module: pnifile-0.8
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Pacific Nanotechnology PNI data files.

Functions:
TypeNameInformation
filepnifilePNI files (.pni)

pnifile

0.8Yeti

Module: point-3.5
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of several points, displayed as crosses or invisible.

Functions:
TypeNameInformation
layerGwyLayerPoint

point

3.5Yeti

Module: polydistort-1.5
© David Nečas (Yeti) & Petr Klapetek 2007

Description: Applies polynomial distortion in the horizontal plane.

Functions:
TypeNameInformation
procpolydistortDistortion → Polynomial

polydistort

1.5Yeti

Module: polylevel-4.1
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts polynomial background.

Functions:
TypeNameInformation
procpolylevelLevel → Polynomial Background

polylevel

4.1Yeti

Module: presentationops-2.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Basic operations with presentation: extraction, removal.

Functions:
TypeNameInformation
procpresentation_removePresentation → Remove Presentation
procpresentation_extractPresentation → Extract Presentation
procpresentation_attachPresentation → Attach Presentation
procpresentation_logscalePresentation → Logscale

presentationops

2.0Yeti

Module: princetonspe-0.1
© David Nečas (Yeti) 2015

Description: Princeton Instruments camera SPE files.

Functions:
TypeNameInformation
fileprincetonspePrinceton Instruments SPE files

princetonspe

0.1Yeti

Module: profile-5.1
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Profile tool, creates profile graphs from selected lines.

Functions:
TypeNameInformation
toolGwyToolProfileExtract profiles along arbitrary lines

profile

5.1Petr Klapetek

Module: projective-1.1
© David Nečas (Yeti) 2021

Description: Layer allowing selection of a projective plane.

Functions:
TypeNameInformation
layerGwyLayerProjective

projective

1.1Yeti

Module: psdf2d-2.1
© David Nečas (Yeti) 2009

Description: Calculates two-dimensional power spectrum density function and extracts its linear profiles.

Functions:
TypeNameInformation
procpsdf2dStatistics → 2D PSDF

psdf2d

2.1Yeti

Module: psdf_logphi-2.0
© David Nečas (Yeti) 2015

Description: Two-dimensional FFT (Fast Fourier Transform) transformed to coordinates (log-frequency, angle).

Functions:
TypeNameInformation
procpsdf_logphiStatistics → Log-Phi PSDF

psdf_logphi

2.0Yeti

Module: psf-4.1
© David Nečas (Yeti) & Petr Klapetek 2017

Description: Transfer function estimation

Functions:
TypeNameInformation
procpsfStatistics → Transfer Function Guess

psf

4.1Petr Klapetek, Yeti

Module: psf-fit-3.0
© David Nečas (Yeti) & Petr Klapetek 2017

Description: Transfer function estimation by fitting explicit function form.

Functions:
TypeNameInformation
procpsf-fitStatistics → Transfer Function Fit

psf-fit

3.0Yeti

Module: psia-0.9
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Park Systems data files.

Functions:
TypeNameInformation
filepsiaPark Systems data files (.tiff, .tif)

psia

0.9Yeti

Module: psppt-1.1
© David Nečas (Yeti) 2021

Description: Imports Park Systems PS-PPT data files.

Functions:
TypeNameInformation
filepspptPark Systems PS-PPT data files (.ps-ppt)

psppt

1.1Yeti

Module: pt3file-0.2
© David Nečas (Yeti) 2009

Description: Imports SymPhoTime data files, version 2.0.

Functions:
TypeNameInformation
filept3filePicoHarp files (.pt3)

pt3file

0.2Yeti

Module: pygwy-2.6
© Jan Hořák & David Nečas (Yeti) 2007

Description: Pygwy, the Gwyddion Python wrapper.

pygwy

2.6Jan Hořák, Yeti

Module: quazarnpic-0.2
© David Nečas (Yeti) 2021

Description: Imports Quazar data files stored as Python pickles v4.

Functions:
TypeNameInformation
filequazarnpicQuazar Python-pickled data (.npic)

quazarnpic

0.2Yeti

Module: quesant-0.6
© David Nečas (Yeti) & Jan Hořák 2008

Description: Imports Quesant file format.

Functions:
TypeNameInformation
filequesantQuesant files (.afm)

quesant

0.6Jan Hořák, Yeti

Module: rank-3.0
© David Nečas (Yeti) & Petr Klapetek 2014

Description: Enhances local contrast using a rank transform.

Functions:
TypeNameInformation
procrankPresentation → Rank

rank

3.0Yeti

Module: rank_filter-2.0
© David Nečas (Yeti) 2019

Description: General k-th rank filter replacing data with k-th rank values from the neighborhood.

Functions:
TypeNameInformation
procrank_filterIntegral Transforms → Rank Filter

rank_filter

2.0Yeti

Module: raveraging-2.0
© David Nečas (Yeti) & Petr Klapetek 2019

Description: Smooths images in polar coordinates.

Functions:
TypeNameInformation
procraveragingDistortion → Radial Smoothing

raveraging

2.0Petr Klapetek

Module: rawfile-3.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Imports raw data files, both ASCII and binary, according to user-specified format.

Functions:
TypeNameInformation
filerawfileRaw data files

rawfile

3.0Yeti

Module: rawgraph-0.8
© David Nečas (Yeti) 2009

Description: Imports simple text files as graph curves.

Functions:
TypeNameInformation
filerawgraphASCII graph curve files

rawgraph

0.8Yeti

Module: readvalue-4.2
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Pointer tool, reads value under pointer.

Functions:
TypeNameInformation
toolGwyToolReadValueRead value under mouse cursor

readvalue

4.2Yeti

Module: rectangle-2.12
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of rectangular areas.

Functions:
TypeNameInformation
layerGwyLayerRectangle

rectangle

2.12Yeti

Module: relate-2.0
© David Nečas 2018

Description: Plots one image data as a function of another and finds relations.

Functions:
TypeNameInformation
procrelateMultidata → Relation

relate

2.0Yeti

Module: renishaw-0.12
© Daniil Bratashov (dn2010), David Necas (Yeti), Renishaw plc. 2014

Description: Imports Renishaw WiRE data files (WDF).

Functions:
TypeNameInformation
filerenishawRenishaw WiRE data files (.wdf)

renishaw

0.12Daniil Bratashov

Module: resample-2.1
© David Nečas (Yeti) 2019

Description: Resamples data to specified pixel size.

Functions:
TypeNameInformation
procresampleBasic Operations → Resample

resample

2.1Yeti

Module: rhk-sm3-0.16
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports RHK Technology SM3 data files.

Functions:
TypeNameInformation
filerhk-sm3RHK SM3 files (.sm3)

rhk-sm3

0.16Yeti

Module: rhk-sm4-0.8
© David Nečas (Yeti) 2009

Description: Imports RHK Technology SM4 data files.

Functions:
TypeNameInformation
filerhk-sm4RHK SM4 files (.sm4)

rhk-sm4

0.8Yeti

Module: rhk-spm32-0.12
© David Nečas (Yeti) & Petr Klapetek, mod by Niv Levy 2007

Description: Imports RHK Technology SPM32 data files.

Functions:
TypeNameInformation
filerhk-spm32RHK SPM32 files (.sm2)

rhk-spm32

0.12Yeti

Module: robotics-0.2
© Miroslav Valtr 2011

Description: Imports Automation & Robotics Dual Lensmapper data files

Functions:
TypeNameInformation
fileroboticsDual Lensmapper files

robotics

0.2Mira

Module: roddeposit_synth-1.0
© Petr Klapetek 2017

Description: Generates rod-like particles using simple dynamical model

Functions:
TypeNameInformation
procrod_deposit_synthSynthetic → Deposition → Rods

roddeposit_synth

1.0Petr Klapetek

Module: rotate-3.1
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Rotates data by arbitrary angle or to make characteristic directions parallel with x or y axis.

Functions:
TypeNameInformation
procrotateBasic Operations → Rotate by Angle
procunrotateCorrect Data → Unrotate

rotate

3.1Yeti

Module: roughness-3.1
© Martin Hasoň & David Nečas (Yeti) 2006

Description: Calculate surface profile parameters.

Functions:
TypeNameInformation
toolGwyToolRoughnessCalculate roughness parameters

roughness

3.1Martin Hasoň, Yeti

Module: rprofile-2.1
© David Nečas (Yeti) & Petr Klapetek 2018

Description: Creates angularly averaged profile graphs.

Functions:
TypeNameInformation
toolGwyToolRprofileExtract angularly averaged profiles

rprofile

2.1Yeti

Module: s94file-1.1
© David Nečas (Yeti) 2013

Description: Imports S94 STM data files.

Functions:
TypeNameInformation
files94fileS94 STM files (.s94)

s94file

1.1Yeti

Module: scale-2.1
© David Nečas (Yeti) & Petr Klapetek & Dirk Kähler 2003

Description: Scales data by arbitrary factor.

Functions:
TypeNameInformation
procscaleBasic Operations → Scale

scale

2.1Yeti

Module: scars-2.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Marks and/or removes scars (horizontal linear artifacts).

Functions:
TypeNameInformation
procscars_markCorrect Data → Mark Scars
procscars_removeCorrect Data → Remove Scars

scars

2.0Yeti

Module: sdfile-0.14
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Surfstand group SDF (Surface Data File) files.

Functions:
TypeNameInformation
filesdfile-binSurfstand SDF files, binary (.sdf)
filesdfile-txtSurfstand SDF files, text (.sdf)
filemicromapMicromap SDF files (.sdfa)

sdfile

0.14Yeti

Module: seiko-0.13
© David Nečas (Yeti) & Markus Pristovsek 2006

Description: Imports Seiko XQB, XQD, XQT and XQP files.

Functions:
TypeNameInformation
fileseikoSeiko files (.xqb, .xqd, .xqt, .xqp)

seiko

0.13Yeti

Module: selectionmanager-3.0
© David Nečas (Yeti) 2009

Description: Grain removal tool, removes continuous parts of mask and/or underlying data.

Functions:
TypeNameInformation
toolGwyToolSelectionManagerDisplay, copy and export selections

selectionmanager

3.0Yeti

Module: semsim-2.0
© David Nečas (Yeti) 2014

Description: Simple SEM image simulation from topography.

Functions:
TypeNameInformation
procsemsimPresentation → SEM Image

semsim

2.0Yeti

Module: sensofar-1.0
© David Nečas (Yeti) & Jan Hořák 2008

Description: Imports Sensofar PLu file format, version 2000 or newer.

Functions:
TypeNameInformation
filesensofarSensofar PLu files (.plu, .apx)

sensofar

1.0Jan Hořák, Yeti

Module: sensofarx-1.1
© David Nečas (Yeti) 2015

Description: Reads Sensofar PLUx files.

Functions:
TypeNameInformation
filesensofarxSensofar PLUx files (.plux)

sensofarx

1.1Yeti

Module: sensolytics-0.5
© David Nečas (Yeti) 2009

Description: Imports Sensolytics text files.

Functions:
TypeNameInformation
filesensolyticsSensolytics text files (.dat)

sensolytics

0.5Yeti

Module: sfunctions-3.3
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Statistical function tool, calculates one-dimensional statistical functions (height distribution, correlations, PSDF, Minkowski functionals) of selected part of data.

Functions:
TypeNameInformation
toolGwyToolSFunctionsCalculate 1D statistical functions

sfunctions

3.3Petr Klapetek

Module: shade-3.0
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Creates a shaded presentation of data.

Functions:
TypeNameInformation
procshadePresentation → Shading

shade

3.0Petr Klapetek

Module: shimadzu-0.6
© David Nečas (Yeti) 2007

Description: Imports Shimadzu SPM data files.

Functions:
TypeNameInformation
fileshimadzuShimadzu files

shimadzu

0.6Yeti

Module: sicmfile-1.3
© Matthew Caldwell 2007-2010

Description: Imports IonScope SICM data files.

Functions:
TypeNameInformation
filesicmIonScope SICM files (.img)

sicmfile

1.3Matthew Caldwell

Module: sis-0.17
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Imports SIS (Surface Imaging Systems) data files.

Functions:
TypeNameInformation
filesisSIS files (.sis)

sis

0.17Yeti

Module: slope_dist-3.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Calculates one- or two-dimensional distribution of slopes or graph of their angular distribution.

Functions:
TypeNameInformation
procslope_distStatistics → Slope Distribution

slope_dist

3.0Yeti

Module: spcfile-0.3
© Daniil Bratashov (dn2010), David Necas (Yeti) 2018

Description: Imports Thermo Fisher SPC files.

Functions:
TypeNameInformation
filespcfileThermo Fisher SPC files

spcfile

0.3Daniil Bratashov

Module: spectro-0.20
© Owain Davies, David Nečas (Yeti) & Petr Klapetek 2006

Description: Point Spectrum, extracts point spectra to a graph.

Functions:
TypeNameInformation
toolGwyToolSpectroExtract and view point spectroscopy data

spectro

0.20Owain Davies

Module: sphere-revolve-3.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts background by sphere revolution.

Functions:
TypeNameInformation
procsphere_revolveLevel → Revolve Sphere

sphere-revolve

3.0Yeti

Module: spip-asc-0.8
© David Nečas (Yeti) 2009

Description: Imports and exports SPIP ASC files.

Functions:
TypeNameInformation
filespip-ascSPIP ASCII files (.asc)

spip-asc

0.8Yeti

Module: spml-0.2
© Jan Hořák 2006

Description: Loads SPML (Scanning Probe Microscopy Markup Language) data files.

Functions:
TypeNameInformation
filespmlSPML files (.xml)

spml

0.2Jan Hořák

Module: spmlab-0.12
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Thermicroscopes SpmLab R3 to R7 data files.

Functions:
TypeNameInformation
filespmlabThermicroscopes SpmLab files

spmlab

0.12Yeti

Module: spmlabf-0.6
© David Nečas (Yeti) 2008

Description: Imports SPMLab floating-point files.

Functions:
TypeNameInformation
filespmlabfSPMLab floating-point files (.flt)

spmlabf

0.6Yeti

Module: spmxfile-1.4
© David Nečas (Yeti) 2014

Description: Reads ATC SPMxFormat files.

Functions:
TypeNameInformation
filespmxfileATC SPMxFormat data (.spm)

spmxfile

1.4Yeti

Module: spotremove-4.2
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Spot removal tool, interpolates small parts of data (displayed on a zoomed view) using selected algorithm.

Functions:
TypeNameInformation
toolGwyToolSpotRemoverInterpolate small defects, manually selected

spotremove

4.2Yeti

Module: stats-4.3
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Statistics tool.

Functions:
TypeNameInformation
toolGwyToolStatsStatistical quantities

stats

4.3Petr Klapetek

Module: stitch-1.2
© Petr Klapetek & Petr Grolich 2017

Description: Stitch multiple images based on offsets of origins.

Functions:
TypeNameInformation
procstitchMultidata → Stitch

stitch

1.2Petr Grolich

Module: stmprg-0.12
© Rok Zitko & David Nečas (Yeti) 2004

Description: Imports Omicron STMPRG data files (tp ta).

Functions:
TypeNameInformation
filestmprgOmicron STMPRG files (tp ta)

stmprg

0.12Rok Zitko, Yeti

Module: stpfile-0.5.3
© David Nečas (Yeti), Petr Klapetek, Chris Anderson 2006

Description: Imports Molecular Imaging STP data files.

Functions:
TypeNameInformation
filestpfileSTP files (.stp)

stpfile

0.5.3Yeti

Module: straighten_path-2.1
© David Nečas (Yeti) 2016

Description: Extracts a straightened part of image along a curve.

Functions:
TypeNameInformation
procstraighten_pathDistortion → Straighten Path

straighten_path

2.1Yeti

Module: surffile-0.12
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Surf data files.

Functions:
TypeNameInformation
filesurffileSurf files (.sur)

surffile

0.12Petr Klapetek

Module: terracefit-2.0
© David Nečas (Yeti) 2019

Description: Fits terraces with polynomial background.

Functions:
TypeNameInformation
procterracefitMeasure Features → Terraces

terracefit

2.0Yeti

Module: tescan-2.0
© David Nečas (Yeti) 2013

Description: Imports Tescan SEM images.

Functions:
TypeNameInformation
filetescan-tifTescan TIF SEM image (.tif)
filetescan-pngTescan two-part SEM image (.hdr + .png)

tescan

2.0Yeti

Module: threshold-2.0
© David Nečas (Yeti) 2010

Description: Limit the data range using a lower/upper threshold.

Functions:
TypeNameInformation
procthresholdBasic Operations → Limit Range

threshold

2.0Yeti

Module: tiaser-0.5
© David Nečas (Yeti), Daniil Bratashov (dn2010) 2012

Description: Imports FEI Tecnai imaging and analysis (former Emispec) files.

Functions:
TypeNameInformation
filetiaserFEI TIA (Emispec) data

tiaser

0.5dn2010

Module: tilt-2.0
© David Nečas (Yeti) 2008

Description: Tilts image by specified amount.

Functions:
TypeNameInformation
proctiltBasic Operations → Tilt

tilt

2.0Yeti

Module: tip_blind-2.1
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Blind estimation of SPM tip using Villarubia's algorithm.

Functions:
TypeNameInformation
proctip_blindSPM Modes → Tip → Blind Estimation

tip_blind

2.1Petr Klapetek

Module: tip_model-3.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Models SPM tip.

Functions:
TypeNameInformation
proctip_modelSPM Modes → Tip → Model Tip

tip_model

3.0Petr Klapetek

Module: tipops-2.0
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Tip operations: dilation (convolution), erosion (reconstruction) and certainty map.

Functions:
TypeNameInformation
proctip_dilationSPM Modes → Tip → Dilation
proctip_reconstructionSPM Modes → Tip → Surface Reconstruction
proctip_mapSPM Modes → Tip → Certainty Map

tipops

2.0Petr Klapetek, Yeti

Module: tipshape-2.1
© Anna Charvatova Campbell 2018

Description: Calculates the tip area function.

Functions:
TypeNameInformation
proctipshapeSPM Modes → Force and Indentation → Area function

tipshape

2.1Anna Charvatova Campbell

Module: trimmed-mean-2.0
© David Nečas (Yeti) 2019

Description: Trimmed mean filtering and leveling.

Functions:
TypeNameInformation
proctrimmed_meanLevel → Trimmed Mean

trimmed-mean

2.0Yeti

Module: ttffile-1.0
© David Nečas (Yeti), Thomas Wagner 2019

Description: Imports Corning Tropel UltraSort files.

Functions:
TypeNameInformation
filettffileCorning Tropel UltraSort data (.ttf)
filecorningcsvfileCorning Tropel UltraSort CSV export (.csv)

ttffile

1.0Yeti, Thomas Wagner

Module: unisoku-0.10
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Unisoku data files (two-part .hdr + .dat).

Functions:
TypeNameInformation
fileunisokuUnisoku files (.hdr + .dat)

unisoku

0.10Yeti

Module: volume_1dfft-1.0
© Petr Klapetek & David Nečas (Yeti) 2023

Description: Performs 1D FFT filtering for all the volume data levels.

Functions:
TypeNameInformation
volumevolume_1dfft

volume_1dfft

1.0Petr Klapetek

Module: volume_addframe-1.0
© Petr Klapetek & David Nečas (Yeti) 2023

Description: Add one frame to volume data stack

Functions:
TypeNameInformation
volumevolume_addframe

volume_addframe

1.0Petr Klapetek

Module: volume_arithmetic-2.1
© David Nečas (Yeti) 2018

Description: Simple arithmetic operations with volume data.

Functions:
TypeNameInformation
volumevolume_arithmetic

volume_arithmetic

2.1Yeti

Module: volume_asciiexport-2.0
© David Nečas (Yeti) 2018

Description: Exports volume data in simple ASCII formats.

Functions:
TypeNameInformation
volumevolume_asciiexport

volume_asciiexport

2.0Yeti

Module: volume_calibrate-2.0
© David Nečas (Yeti) & Petr Klapetek 2013

Description: Recalibrate volume data dimensions or value range.

Functions:
TypeNameInformation
volumevolcal

volume_calibrate

2.0Petr Klapetek

Module: volume_crop-1.0
© Petr Klapetek & David Nečas (Yeti) 2023

Description: Performs XY plane cropping of all the levels.

Functions:
TypeNameInformation
volumevolume_crop

volume_crop

1.0Petr Klapetek

Module: volume_drift-1.0
© Petr Klapetek 2023

Description: Estimates drift across stacked high-speed SPM frames.

Functions:
TypeNameInformation
volumevolume_drift

volume_drift

1.0Petr Klapetek

Module: volume_equiplane-2.0
© Petr Klapetek 2019

Description: Extracts z-coordinates of isosurfaces from volume data to an image.

Functions:
TypeNameInformation
volumevolume_equiplane

volume_equiplane

2.0Petr Klapetek

Module: volume_extract-2.1
© David Nečas (Yeti) & Petr Klapetek 2013

Description: Shows 3D representations of volume data

Functions:
TypeNameInformation
volumeextract

volume_extract

2.1Petr Klapetek

Module: volume_facetlevel-1.0
© David Nečas (Yeti) & Petr Klapetek 2023

Description: Performs facet leveling on all XY planes

Functions:
TypeNameInformation
volumevolume_facetlevel

volume_facetlevel

1.0Petr Klapetek

Module: volume_fdfit-1.2
© David Nečas (Yeti) & Petr Klapetek 2013

Description: Evaluate volume force-distance data

Functions:
TypeNameInformation
volumevolume_fdfit

volume_fdfit

1.2Petr Klapetek

Module: volume_flattenbase-1.0
© David Nečas (Yeti) & Petr Klapetek 2023

Description: Flattens base on all XY planes

Functions:
TypeNameInformation
volumevolume_flattenbase

volume_flattenbase

1.0Petr Klapetek

Module: volume_invert-1.1
© David Nečas (Yeti) & Petr Klapetek 2013

Description: Inverts value in volume data

Functions:
TypeNameInformation
volumevolume_invert

volume_invert

1.1Petr Klapetek

Module: volume_kmeans-2.0
© David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov & Evgeniy Ryabov 2014

Description: Calculates K-means clustering on volume data.

Functions:
TypeNameInformation
volumekmeans

volume_kmeans

2.0Daniil Bratashov & Evgeniy Ryabov

Module: volume_kmedians-2.0
© David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov & Evgeniy Ryabov 2014

Description: Calculates K-medians clustering on volume data.

Functions:
TypeNameInformation
volumekmedians

volume_kmedians

2.0Daniil Bratashov & Evgeniy Ryabov

Module: volume_lawnize-1.0
© David Nečas (Yeti) 2021

Description: Creates curve map data from volume data.

Functions:
TypeNameInformation
volumevolume_lawnize

volume_lawnize

1.0Yeti

Module: volume_linelevel-1.0
© Petr Klapetek & David Nečas (Yeti) 2023

Description: Performe line leveling for all the volume data levels.

Functions:
TypeNameInformation
volumevolume_linelevel

volume_linelevel

1.0Petr Klapetek

Module: volume_linestat-2.0
© David Nečas (Yeti) 2015

Description: Summarizes profiles of volume data to a channel.

Functions:
TypeNameInformation
volumevolume_linestat

volume_linestat

2.0Yeti

Module: volume_localdetect-1.0
© Petr Klapetek & David Nečas (Yeti) 2023

Description: Performs localization merge of all the levels

Functions:
TypeNameInformation
volumevolume_localdetect

volume_localdetect

1.0Petr Klapetek

Module: volume_meanplanelevel-1.0
© David Nečas (Yeti) & Petr Klapetek 2023

Description: Levels all XY planes by their mean plane

Functions:
TypeNameInformation
volumevolume_meanplanelevel

volume_meanplanelevel

1.0Petr Klapetek

Module: volume_mfmrecalc-2.0
© David Nečas (Yeti) & Petr Klapetek 2018

Description: Converts the MFM data to force gradient.

Functions:
TypeNameInformation
volumevolume_mfmrecalc

volume_mfmrecalc

2.0Petr Klapetek, Robb Puttock

Module: volume_outliers-1.1
© David Nečas (Yeti) & Petr Klapetek 2018

Description: Removes outliers from all XY planes

Functions:
TypeNameInformation
volumevolume_outliers

volume_outliers

1.1Petr Klapetek

Module: volume_planelevel-1.1
© David Nečas (Yeti) & Petr Klapetek 2018

Description: Levels all XY planes

Functions:
TypeNameInformation
volumevolume_planelevel

volume_planelevel

1.1Petr Klapetek

Module: volume_planestat-2.1
© David Nečas (Yeti) 2018

Description: Summarizes volume data planes to a graph.

Functions:
TypeNameInformation
volumevolume_planestat

volume_planestat

2.1Yeti

Module: volume_psf-3.0
© Petr Klapetek, Robb Puttock & David Nečas (Yeti) 2018

Description: Calculates the volume PSF.

Functions:
TypeNameInformation
volumevolume_psf

volume_psf

3.0Petr Klapetek

Module: volume_removeframe-1.0
© Petr Klapetek & David Nečas (Yeti) 2023

Description: Remove one frame from volume data stack

Functions:
TypeNameInformation
volumevolume_removeframe

volume_removeframe

1.0Petr Klapetek

Module: volume_rephase-2.1
© Petr Klapetek 2019

Description: Swaps phase in continuous data based on user's selection

Functions:
TypeNameInformation
volumevolume_rephase

volume_rephase

2.1Petr Klapetek

Module: volume_scars-1.0
© Petr Klapetek & David Nečas (Yeti) 2023

Description: Performs scars removal for all the volume data levels.

Functions:
TypeNameInformation
volumevolume_scars

volume_scars

1.0Petr Klapetek

Module: volume_slice-3.1
© David Nečas (Yeti) 2015

Description: Extracts image planes and line graphs from volume data.

Functions:
TypeNameInformation
volumevolume_slice

volume_slice

3.1Yeti

Module: volume_stepline-1.0
© David Nečas (Yeti) & Petr Klapetek & Luke Somers 2023

Description: Performs step line correction

Functions:
TypeNameInformation
volumevolume_stepline

volume_stepline

1.0Yeti, Luke Somers, Petr Klapetek

Module: volume_strayfield-2.0
© Petr Klapetek, Robb Puttock & David Nečas (Yeti) 2018

Description: Checks the stray field dependence consistency.

Functions:
TypeNameInformation
volumevolume_strayfield

volume_strayfield

2.0Petr Klapetek

Module: volume_swaxes-2.0
© David Nečas (Yeti) 2017

Description: Swaps axes of volume data.

Functions:
TypeNameInformation
volumevolume_swaxes

volume_swaxes

2.0Yeti

Module: volume_xyarithmetics-1.1
© David Nečas (Yeti) & Petr Klapetek 2023

Description: Simple arithmetic operations with volume and plane data.

Functions:
TypeNameInformation
volumevolume_xyarithmetics

volume_xyarithmetics

1.1Petr Klapetek,

Module: volume_xystitch-1.0
© Petr Klapetek & David Nečas (Yeti) 2023

Description: Merges all XY planes into XYZ data

Functions:
TypeNameInformation
volumevolume_xystitch

volume_xystitch

1.0Petr Klapetek

Module: volume_zcal-2.0
© David Nečas (Yeti) 2015

Description: Attaches, extracts and removes volume data z-axis calibration.

Functions:
TypeNameInformation
volumevolume_zcal

volume_zcal

2.0Yeti

Module: volume_zposlevel-2.0
© Petr Klapetek 2019

Description: Shifts values in z curves to be zero at defined position.

Functions:
TypeNameInformation
volumevolume_zposlevel

volume_zposlevel

2.0Petr Klapetek

Module: volumeops-1.1
© David Nečas (Yeti) 2017

Description: Inverts value in volume data

Functions:
TypeNameInformation
volumeextract_preview

volumeops

1.1Yeti

Module: volumize-1.2
© David Nečas (Yeti) & Petr Klapetek 2013

Description: Converts datafield to 3D volume data.

Functions:
TypeNameInformation
procvolumizeBasic Operations → Volumize

volumize

1.2Petr Klapetek

Module: volumize_layers-3.0
© David Nečas (Yeti) & Petr Klapetek 2013

Description: Converts all datafields to 3D volume data.

Functions:
TypeNameInformation
procvolumize_layersBasic Operations → Volumize Layers

volumize_layers

3.0Petr Klapetek

Module: wave_synth-2.0
© David Nečas (Yeti) 2014

Description: Generates various kinds of waves.

Functions:
TypeNameInformation
procwave_synthSynthetic → Waves

wave_synth

2.0Yeti

Module: wfr_synth-1.0
© David Nečas (Yeti) 2021

Description: Generates images by simulating a propagating wetting front.

Functions:
TypeNameInformation
procwfr_synthSynthetic → Wetting

wfr_synth

1.0Yeti

Module: win_stm-0.6
© Jeffrey J. Schwartz April 2014

Description: Imports WinSTM (.stm) files.

Functions:
TypeNameInformation
filewin_stmWinSTM files (.stm)

win_stm

0.6Jeffrey J. Schwartz

Module: wipfile-0.11
© David Nečas (Yeti) & Petr Klapetek & Daniil Bratashov 2010

Description: Imports WItec Project data files.

Functions:
TypeNameInformation
filewipfileWItec Project files (.wip)

wipfile

0.11Daniil Bratashov

Module: witec-asc-0.3
© David Nečas (Yeti) 2011

Description: Imports WITec ASCII export files.

Functions:
TypeNameInformation
filewitec-ascWITec ASCII files (.dat)

witec-asc

0.3Yeti

Module: witfile-0.7
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports WITec WIT data files.

Functions:
TypeNameInformation
filewitfileWITec files (.wit)

witfile

0.7Yeti

Module: wpour_mark-2.0
© David Nečas (Yeti) 2014

Description: Segments image using watershed with pre- and postprocessing.

Functions:
TypeNameInformation
procwpour_markGrains → Mark by Segmentation

wpour_mark

2.0Yeti

Module: wrapvalue-2.0
© David Nečas (Yeti) 2019

Description: Wraps periodic values to a different range.

Functions:
TypeNameInformation
procwrapvalueBasic Operations → Wrap Value

wrapvalue

2.0Yeti

Module: wrustfile-1.3
© David Nečas (Yeti) 2021

Description: Imports AFM files from Department of Nanometrology, WRUST.

Functions:
TypeNameInformation
filewrustfileWRUST Department of Nanometrology AFM data (.dat)

wrustfile

1.3Yeti

Module: wsffile-0.6
© David Nečas (Yeti) 2011

Description: Imports WSF ASCII files.

Functions:
TypeNameInformation
filewsffileWSF ASCII files (.wsf)

wsffile

0.6Yeti

Module: wsxmfile-0.22
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Nanotec WSxM data files.

Functions:
TypeNameInformation
filewsxmfileWSxM files (.tom, .top, .stp)
filewsxmcurveWSxM curve files (.cur)

wsxmfile

0.22Yeti

Module: xydenoise-2.0
© David Nečas (Yeti) & Petr Klapetek 2012

Description: Denoises measurement on basis of two orthogonal scans.

Functions:
TypeNameInformation
procxydenoiseMultidata → XY Denoise

xydenoise

2.0Petr Klapetek

Module: xyz_autocrop-1.0
© David Nečas (Yeti) & Petr Klapetek 2023

Description: Simple XYZ automated crop.

Functions:
TypeNameInformation
xyzautocrop

xyz_autocrop

1.0Petr Klapetek

Module: xyz_channels-2.0
© David Nečas (Yeti) & Petr Klapetek 2018

Description: Converts three channels to XYZ data.

Functions:
TypeNameInformation
procxyz_channelsBasic Operations → XYZ from Channels

xyz_channels

2.0Petr Klapetek

Module: xyz_crop-1.0
© Petr Klapetek 2023

Description: XYZ data crop.

Functions:
TypeNameInformation
xyzxyz_crop

xyz_crop

1.0Petr Klapetek

Module: xyz_level-2.0
© David Nečas (Yeti) 2016

Description: Simple XYZ data leveling.

Functions:
TypeNameInformation
xyzxyz_fix_zero
xyzxyz_zero_mean
xyzxyz_level

xyz_level

2.0Yeti

Module: xyz_raster-2.0
© David Nečas (Yeti) 2016

Description: Rasterizes XYZ data to images.

Functions:
TypeNameInformation
xyzxyz_raster

xyz_raster

2.0Yeti

Module: xyz_split-2.0
© Petr Klapetek 2019

Description: XYZ data split based on direction.

Functions:
TypeNameInformation
xyzxyz_split

xyz_split

2.0Petr Klapetek

Module: xyz_tcut-1.0
© Petr Klapetek 2023

Description: XYZ data crop as time series.

Functions:
TypeNameInformation
xyzxyz_tcut

xyz_tcut

1.0Petr Klapetek

Module: xyz_zdrift-1.0
© Petr Klapetek 2023

Description: XYZ data z-drift correction.

Functions:
TypeNameInformation
xyzxyz_zdrift

xyz_zdrift

1.0Petr Klapetek

Module: xyzexport-3.1
© David Nečas (Yeti) 2015

Description: Exports data as simple XYZ text file.

Functions:
TypeNameInformation
filexyzexportXYZ text data (.xyz)

xyzexport

3.1Yeti

Module: xyzize-1.2
© David Nečas (Yeti) 2016

Description: Converts data fields to XYZ data.

Functions:
TypeNameInformation
procxyzizeBasic Operations → XYZize

xyzize

1.2Yeti

Module: xyzops-1.0
© David Nečas (Yeti) 2018

Description: Elementary XYZ data operations.

Functions:
TypeNameInformation
xyzxyz_merge
xyzxyz_average

xyzops

1.0Yeti

Module: zeiss-0.6
© David Nečas (Yeti) 2011

Description: Imports Carl Zeiss SEM images.

Functions:
TypeNameInformation
filezeissCarl Zeiss SEM scans (.tif)

zeiss

0.6Yeti

Module: zeisslsm-0.4
© Daniil Bratashov (dn2010), David Nečas (Yeti) 2017

Description: Imports Carl Zeiss CLSM images.

Functions:
TypeNameInformation
filezeisslsmCarl Zeiss CLSM images (.lsm)

zeisslsm

0.4Daniil Bratashov

Module: zemax-1.1
© David Nečas (Yeti) 2013

Description: Imports Zemax grid sag data files.

Functions:
TypeNameInformation
filezemaxZemax grid sag data (.dat)

zemax

1.1Yeti

Module: zero_crossing-1.0
© David Nečas (Yeti) & Petr Klapetek 2019

Description: Zero crossing edge detection.

Functions:
TypeNameInformation
proczero_crossingPresentation → Edge Detection → Zero Crossing

zero_crossing

1.0Yeti

Module: zonfile-1.0
© David Nečas (Yeti) 2023

Description: Reads Keyence ZON files.

Functions:
TypeNameInformation
filezonfileKeyence ZON data (.zon)

zonfile

1.0Yeti
1.5 (yeti, 2014-06-08 11:10:03)
© David Nečas and Petr Klapetek

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