Gwyddion – Free SPM (AFM, SNOM/NSOM, STM, MFM, …) data analysis software

Module List

Generated from version 2.20. (If the table looks messy, see below.)

NameVersionAuthors

Module: acf2d-1.0
© David Nečas (Yeti) 2007

Description: Calculates two-dimensional autocorrelation function.

Functions:
TypeNameInformation
procacf2dStatistics → 2D Autocorrelation

acf2d

1.0Yeti

Module: aistfile-0.2
© David Nečas (Yeti) 2009

Description: Imports AIST-NT data files.

Functions:
TypeNameInformation
fileaistfileAIST-NT files (.aist)

aistfile

0.2Yeti

Module: angle_dist-1.6
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Calculates two-dimensional distribution of angles, that is projections of slopes to all directions.

Functions:
TypeNameInformation
procangle_distStatistics → Angle Distribution

angle_dist

1.6Yeti

Module: apefile-0.9
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports APE (Applied Physics and Engineering) data files.

Functions:
TypeNameInformation
fileapefileAPE files (.dat)

apefile

0.9Yeti

Module: arithmetic-2.5
© David Nečas (Yeti) 2004

Description: Simple arithmetic operations with two data fields (or a data field and a scalar).

Functions:
TypeNameInformation
procarithmeticMultidata → Arithmetic

arithmetic

2.5Yeti

Module: asciiexport-1.3
© David Nečas (Yeti) 2004

Description: Exports data as simple ASCII matrix.

Functions:
TypeNameInformation
fileasciiexportASCII data matrix (.txt)

asciiexport

1.3Yeti

Module: assing-afm-0.16
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Assing AFM data files.

Functions:
TypeNameInformation
fileassing-afmAssing AFM files (.afm)

assing-afm

0.16Yeti

Module: attocube-0.1
© David Nečas (Yeti) 2009

Description: Imports Attocube Systems ASC files.

Functions:
TypeNameInformation
fileattocubeAttocube ASCII files (.asc)

attocube

0.1Yeti

Module: axis-2.6
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of horizontal or vertical lines.

Functions:
TypeNameInformation
layerGwyLayerAxis

axis

2.6Yeti

Module: basicops-1.7
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Basic operations like flipping, value inversion, and rotation by multiples of 90 degrees.

Functions:
TypeNameInformation
procinvert_valueBasic Operations → Invert Value
procflip_horizontallyBasic Operations → Flip Horizontally
procflip_verticallyBasic Operations → Flip Vertically
procrotate_180Basic Operations → Flip Both
procrotate_90_cwBasic Operations → Rotate Clockwise
procrotate_90_ccwBasic Operations → Rotate Counterclockwise
procsquare_samplesBasic Operations → Square Samples
procnull_offsetsBasic Operations → Null Offsets

basicops

1.7Yeti

Module: bcrfile-0.13
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Image Metrology BCR data files.

Functions:
TypeNameInformation
filebcrfileBCR files (.bcr, .bcrf)

bcrfile

0.13Yeti

Module: burleigh-0.5
© David Nečas (Yeti) & Petr Klapetek & Hans-Peter Doerr 2006

Description: Imports Burleigh IMG data files version 2.1.

Functions:
TypeNameInformation
fileburleighBurleigh 2.1 files (.img)

burleigh

0.5Yeti

Module: burleigh_bii-0.2
© Jan Hořák & David Nečas (Yeti) & Petr Klapetek 2008

Description: Imports Burleigh BII binary data files.

Functions:
TypeNameInformation
fileburleigh_biiBurleigh Image Studio files (.bii)

burleigh_bii

0.2Jan Hořák, Yeti

Module: burleigh_exp-0.1
© David Nečas (Yeti) 2007

Description: Imports Burleigh text/bin exported images.

Functions:
TypeNameInformation
fileburleigh_expBurleigh exported data (.txt, .bin)

burleigh_exp

0.1Yeti

Module: calibrate-2.8
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Recalibrates scan lateral dimensions or value range.

Functions:
TypeNameInformation
proccalibrateBasic Operations → Recalibrate

calibrate

2.8Petr Klapetek

Module: convolution_filter-1.5
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Generic convolution filter with a user-defined matrix.

Functions:
TypeNameInformation
procconvolution_filterIntegral Transforms → Convolution Filter

convolution_filter

1.5Yeti

Module: createc-0.11
© Rok Zitko, David Nečas (Yeti) 2004

Description: Imports Createc data files.

Functions:
TypeNameInformation
filecreatecCreatec files (.dat)

createc

0.11Rok Zitko

Module: crop-2.8
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Crop tool, crops data to smaller size.

Functions:
TypeNameInformation
toolGwyToolCropCrop data

crop

2.8Yeti

Module: crosscor-1.4
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Calculates cross-correlation of two data fields.

Functions:
TypeNameInformation
proccrosscorMultidata → Cross-Correlation

crosscor

1.4Petr Klapetek

Module: curvature-1.0
© David Nečas (Yeti) 2009

Description: Calculates overall curvature.

Functions:
TypeNameInformation
proccurvatureLevel → Curvature

curvature

1.0Yeti

Module: cwt-1.4
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Two-dimensional CWT (Continuous Wavelet Transform).

Functions:
TypeNameInformation
proccwtIntegral Transforms → 2D CWT

cwt

1.4Petr Klapetek

Module: distance-2.11
© Nenad Ocelic & David Nečas (Yeti) & Petr Klapetek 2004

Description: Distance measurement tool, measures distances and angles.

Functions:
TypeNameInformation
toolGwyToolDistanceMeasure distances and directions between points

distance

2.11Nenad Ocelic

Module: dmefile-0.4
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Danish Micro Engineering (DME) data files.

Functions:
TypeNameInformation
filedmefileDME files (.img)

dmefile

0.4Yeti

Module: drift-2.3
© David Nečas (Yeti) & Petr Klapetek 2007

Description: Evaluates and/or correct thermal drift in fast scan axis.

Functions:
TypeNameInformation
procdriftCorrect Data → Compensate Drift

drift

2.3Petr Klapetek, Yeti

Module: dwt-1.6
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Two-dimensional DWT (Discrete Wavelet Transform).

Functions:
TypeNameInformation
procdwtIntegral Transforms → 2D DWT

dwt

1.6Petr Klapetek

Module: dwtanisotropy-1.6
© David Nečas (Yeti) & Petr Klapetek 2003

Description: 2D DWT anisotropy detection based on X/Y components ratio.

Functions:
TypeNameInformation
procdwtanisotropyIntegral Transforms → DWT Anisotropy

dwtanisotropy

1.6Petr Klapetek

Module: ecsfile-0.6
© David Nečas (Yeti) & Petr Klapetek & Markus Pristovsek 2006

Description: Imports ECS IMG files.

Functions:
TypeNameInformation
fileecsfileECS files (.img)

ecsfile

0.6Yeti

Module: edge-1.11
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Several edge detection methods (Laplacian of Gaussian, Canny, and some experimental), creates presentation.

Functions:
TypeNameInformation
procedge_laplacianPresentation → Edge Detection → Laplacian of Gaussian
procedge_cannyPresentation → Edge Detection → Canny
procedge_rmsPresentation → Edge Detection → RMS
procedge_rms_edgePresentation → Edge Detection → RMS Edge
procedge_nonlinearityPresentation → Edge Detection → Local Nonlinearity
procedge_hough_linesPresentation → Edge Detection → Hough Lines
procedge_harrisPresentation → Edge Detection → Harris Corner
procedge_inclinationPresentation → Edge Detection → Inclination
procedge_stepPresentation → Edge Detection → Step
procedge_zero_crossingPresentation → Edge Detection → Zero Crossing

edge

1.11Petr Klapetek

Module: ellipse-1.6
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Layer allowing selection of elliptic areas.

Functions:
TypeNameInformation
layerGwyLayerEllipse

ellipse

1.6Yeti

Module: ezdfile-0.7.1
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Nanosurf EZD and NID data files.

Functions:
TypeNameInformation
fileezdfileNanosurf files (.ezd, .nid)

ezdfile

0.7.1Yeti

Module: facet-level-2.3
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Automatic facet-orientation based levelling. Levels data to make facets point up.

Functions:
TypeNameInformation
procfacet-levelLevel → Facet Level

facet-level

2.3Yeti

Module: facet_analysis-1.7
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Visualizes, marks and measures facet orientation.

Functions:
TypeNameInformation
procfacet_analysisStatistics → Facet Analysis

facet_analysis

1.7Yeti

Module: fft-1.9
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Two-dimensional FFT (Fast Fourier Transform).

Functions:
TypeNameInformation
procfftIntegral Transforms → 2D FFT

fft

1.9Petr Klapetek

Module: fft_filter_1d-2.4
© David Nečas (Yeti) & Petr Klapetek 2004

Description: FFT filtering

Functions:
TypeNameInformation
procfft_filter_1dCorrect Data → 1D FFT Filtering

fft_filter_1d

2.4Petr Klapetek

Module: fft_filter_2d-1.6.1
© Chris Anderson, Molecular Imaging Corp. 2005

Description: 2D FFT Filtering

Functions:
TypeNameInformation
procfft_filter_2dCorrect Data → 2D FFT Filtering

fft_filter_2d

1.6.1Chris Anderson

Module: fft_profile-1.0
© David Nečas (Yeti) 2009

Description: Reads radial sections of two-dimensional power spectrum density function.

Functions:
TypeNameInformation
procfft_profileStatistics → PSDF Section

fft_profile

1.0Yeti

Module: fft_synth-1.0
© David Nečas (Yeti) 2009

Description: Generates random surfaces using spectral synthesis.

Functions:
TypeNameInformation
procfft_synthSynthetic → Spectral

fft_synth

1.0Yeti

Module: filter-3.6
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Filter tool, processes selected part of data with a filter (conservative denoise, mean, median. Kuwahara, minimum, maximum).

Functions:
TypeNameInformation
toolGwyToolFilterBasic filters: mean, median, denoise, …

filter

3.6Petr Klapetek

Module: fit_2d-1.5
© David Nečas (Yeti) & Petr Klapetek 2004

Description: 2D fitting

Functions:
TypeNameInformation
procfit_2dLevel → Fit Sphere

fit_2d

1.5Petr Klapetek

Module: fraccor-1.2
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Removes data under mask using fractal interpolation.

Functions:
TypeNameInformation
procfraccorCorrect Data → Fractal Correction

fraccor

1.2Petr Klapetek

Module: fractal-1.7
© David Nečas (Yeti) & Petr Klapetek & Jindřich Bílek 2004

Description: Calculates fractal dimension using several methods (partitioning, box counting, triangulation, power spectrum).

Functions:
TypeNameInformation
procfractalStatistics → Fractal Dimension

fractal

1.7Jindřich Bilek & Petr Klapetek

Module: gradient-1.5
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Creates presentations with various gradients (Sobel, Prewitt).

Functions:
TypeNameInformation
procsobel_horizontalPresentation → Gradient → Sobel (horizontal)
procsobel_verticalPresentation → Gradient → Sobel (vertical)
procprewitt_horizontalPresentation → Gradient → Prewitt (horizontal)
procprewitt_verticalPresentation → Gradient → Prewitt (vertical)
procazimuthPresentation → Gradient → Azimuth

gradient

1.5Petr Klapetek

Module: grain_cross-1.0
© David Nečas 2007

Description: Plots one grain quantity as a function of another.

Functions:
TypeNameInformation
procgrain_crossGrains → Correlate

grain_cross

1.0Yeti

Module: grain_dist-3.7
© David Nečas (Yeti) & Petr Klapetek & Sven Neumann 2003

Description: Evaluates distribution of grains (continuous parts of mask).

Functions:
TypeNameInformation
procgrain_distGrains → Distributions
procgrain_statGrains → Statistics

grain_dist

3.7Petr Klapetek, Sven Neumann, Yeti

Module: grain_mark-1.15
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Marks grains by thresholding (height, slope, curvature).

Functions:
TypeNameInformation
procgrain_markGrains → Mark by Threshold

grain_mark

1.15Petr Klapetek

Module: grain_rem_threshold-1.14
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Removes grains by thresholding (height, size).

Functions:
TypeNameInformation
procgrain_rem_thresholdGrains → Remove by Threshold

grain_rem_threshold

1.14Petr Klapetek

Module: grain_wshed-1.16
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Marks grains by watershed algorithm.

Functions:
TypeNameInformation
procgrain_wshedGrains → Mark by Watershed

grain_wshed

1.16Petr Klapetek

Module: grainmeasure-1.4
© David Nečas (Yeti) 2007

Description: Grain measurement tool, calculates characteristics of selected countinous parts of mask.

Functions:
TypeNameInformation
toolGwyToolGrainMeasureMeasure individual grains (continuous parts of mask)

grainmeasure

1.4Yeti

Module: grainremover-3.4
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Grain removal tool, removes continuous parts of mask and/or underlying data.

Functions:
TypeNameInformation
toolGwyToolGrainRemoverRemove individual grains (continuous parts of mask)

grainremover

3.4Petr Klapetek, Yeti

Module: graph_cd-2.1
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Critical dimension measurements

Functions:
TypeNameInformation
graphgraph_cdCritical Dimension

graph_cd

2.1Petr Klapetek

Module: graph_cut-1.0
© David Nečas (Yeti) & Petr Klapetek 2007

Description: Cut graph

Functions:
TypeNameInformation
graphgraph_cutCut Graph

graph_cut

1.0Petr Klapetek

Module: graph_export_ascii-1.5
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Exports graph data to text files.

Functions:
TypeNameInformation
graphgraph_export_asciiExport Text

graph_export_ascii

1.5Petr Klapetek

Module: graph_export_bitmap-1.2
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Export graph into bitmap

Functions:
TypeNameInformation
graphgraph_export_bitmapExport Bitmap

graph_export_bitmap

1.2Petr Klapetek

Module: graph_export_vector-1.2
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Export graph in postscript

Functions:
TypeNameInformation
graphgraph_export_vectorExport PostScript

graph_export_vector

1.2Petr Klapetek

Module: graph_fdfit-1.0
© David Nečas (Yeti) & Petr Klapetek 2007

Description: Fit force-distance data

Functions:
TypeNameInformation
graphgraph_fdfitFit FD Curve

graph_fdfit

1.0Petr Klapetek

Module: graph_fit-2.4
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Fit graph with function

Functions:
TypeNameInformation
graphgraph_fitFit Function

graph_fit

2.4Petr Klapetek

Module: graph_level-1.3
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Level graph by line.

Functions:
TypeNameInformation
graphgraph_levelLevel

graph_level

1.3Petr Klapetek

Module: gsffile-1.0
© David Nečas (Yeti) 2010

Description: Reads and exports Gwyddion Simple Field files.

Functions:
TypeNameInformation
filegsffileGwyddion Simple Field (.gsf)

gsffile

1.0Yeti

Module: gwyfile-0.15
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Loads and saves Gwyddion native data files (serialized objects).

Functions:
TypeNameInformation
filegwyfileGwyddion native format (.gwy)

gwyfile

0.15Yeti

Module: hdf4file-0.6
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Hierarchical Data Format (HDF) files, version 4.

Functions:
TypeNameInformation
filepsifilePsi HDF4 files (.hdf)

hdf4file

0.6Yeti

Module: hitachi-afm-0.6
© David Nečas (Yeti) & Petr Klapetek & Markus Pristovsek 2005

Description: Imports Hitachi AFM files.

Functions:
TypeNameInformation
filehitachi-afmHitachi AFM files (.afm)
filehitachi-afm-oldHitachi AFM files, old (.afm)

hitachi-afm

0.6Yeti

Module: hough-1.1
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Hough transform.

Functions:
TypeNameInformation
prochoughIntegral Transforms → Hough

hough

1.1Petr Klapetek

Module: icolorange-3.10
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Interactive color range tool, allows to select data range false color scale should map to, either on data or on height distribution histogram.

Functions:
TypeNameInformation
toolGwyToolColorRangeStretch color range to part of data

icolorange

3.10Yeti

Module: igorfile-0.4
© David Nečas (Yeti) 2009

Description: Imports Igor binary waves (.ibw).

Functions:
TypeNameInformation
fileigorfileIgor binary waves (.ibw)

igorfile

0.4Yeti

Module: immerse-2.3
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Immerse high resolution detail into overall image.

Functions:
TypeNameInformation
procimmerseMultidata → Immerse Detail

immerse

2.3Petr Klapetek

Module: indent_analyze-0.1.4
© Lukáš Chvátal 2005

Description: Analyses nanoindentation structure (volumes, surfaces, ...).

Functions:
TypeNameInformation
procindent_analyzeIndentor → Analyze

indent_analyze

0.1.4Lukáš Chvátal

Module: intematix-0.3
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Intematix SDF data files.

Functions:
TypeNameInformation
fileintematixIntematix SDF data files (.sdf)

intematix

0.3Yeti

Module: jeol-0.5
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports JEOL data files.

Functions:
TypeNameInformation
filejeolJEOL data files (.tif)

jeol

0.5Yeti

Module: jpkscan-0.8
© JPK Instruments AG 2005-2007

Description: Imports JPK image scans.

Functions:
TypeNameInformation
filejpkscanJPK image scans (.jpk)

jpkscan

0.8Sven Neumann, Yeti

Module: laplace-1.3
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Removes data under mask, interpolating them with Laplace equation solution.

Functions:
TypeNameInformation
proclaplaceCorrect Data → Remove Data Under Mask

laplace

1.3Petr Klapetek

Module: level-1.7
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Levels data by simple plane subtraction or by rotation, and fixes minimal or mean value to zero.

Functions:
TypeNameInformation
proclevelLevel → Plane Level
proclevel_rotateLevel → Level Rotate
procfix_zeroLevel → Fix Zero
proczero_meanLevel → Zero Mean Value

level

1.7Yeti

Module: level3-2.5
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Three-point level tool, levels data by subtracting a plane fitted through three selected points.

Functions:
TypeNameInformation
toolGwyToolLevel3Level data by fitting a plane through three points

level3

2.5Yeti

Module: line-3.3
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of arbitrary straight lines.

Functions:
TypeNameInformation
layerGwyLayerLine

line

3.3Yeti

Module: linecorrect-1.7
© David Nečas (Yeti) & Petr Klapetek & Luke Somers 2004

Description: Corrects line defects (mostly experimental algorithms).

Functions:
TypeNameInformation
procline_correct_modusCorrect Data → Modus Line Correction
procline_correct_medianCorrect Data → Median Line Correction
procline_correct_median_differenceCorrect Data → Median Difference Line Correction
procline_correct_matchCorrect Data → Match Line Correction
procline_correct_stepCorrect Data → Step Line Correction

linecorrect

1.7Yeti, Luke Somers

Module: linestats-1.3
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Row/column statistical function tool, mean values, medians, maxima, minima, RMS, ..., of rows or columns.

Functions:
TypeNameInformation
toolGwyToolLineStatsCalculate row/column statistical functions

linestats

1.3Yeti

Module: local_contrast-1.2
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Maximizes local contrast.

Functions:
TypeNameInformation
proclocal_contrastPresentation → Local Contrast

local_contrast

1.2Yeti

Module: mapvue-0.2
© David Nečas (Yeti) 2009

Description: Imports MapVue data files (.map).

Functions:
TypeNameInformation
filemapvueMapVue files (.map)

mapvue

0.2Yeti

Module: mark_with-1.1
© David Nečas (Yeti) 2009

Description: Creates or modifies a mask using other channels.

Functions:
TypeNameInformation
procmark_withMask → Mark With

mark_with

1.1Yeti

Module: maskcor-1.5
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Creates mask by correlation with another data.

Functions:
TypeNameInformation
procmaskcorMultidata → Mask by Correlation

maskcor

1.5Petr Klapetek

Module: maskedit-2.8
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Mask editor tool, allows to interactively add or remove parts of mask.

Functions:
TypeNameInformation
toolGwyToolMaskEditorEdit mask

maskedit

2.8Yeti

Module: maskops-1.3
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Basic operations with mask: inversion, removal, extraction.

Functions:
TypeNameInformation
procmask_removeMask → Remove Mask
procmask_invertMask → Invert Mask
procmask_extractMask → Extract Mask

maskops

1.3Yeti

Module: median-bg-1.3
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts background using a rank-based algorithm.

Functions:
TypeNameInformation
procmedian-bgLevel → Median Level

median-bg

1.3Yeti

Module: merge-1.2
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Merges two images.

Functions:
TypeNameInformation
procmergeMultidata → Merge

merge

1.2Petr Klapetek

Module: metropro-0.5
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports binary MetroPro (Zygo) data files.

Functions:
TypeNameInformation
filemetroproMetroPro files (.dat)

metropro

0.5Yeti

Module: microprof-0.4
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports MicroProf FRT profilometer data files.

Functions:
TypeNameInformation
filemicroprofMicroProf FRT files (.frt)
filemicroprof_txtMicroProf FRT text files (.txt)

microprof

0.4Yeti

Module: mifile-0.13
© Chris Anderson, Molecular Imaging Corp. 2006

Description: Imports Molecular Imaging MI data files.

Functions:
TypeNameInformation
filemifilePicoView Data Files (.mi)

mifile

0.13Chris Anderson

Module: nanoeducator-0.3
© David Nečas (Yeti) 2009

Description: Imports Nanoeducator data files.

Functions:
TypeNameInformation
filenanoeducatorNanoeducator files (.mspm, .spm, .stm)

nanoeducator

0.3Yeti

Module: nanonics-0.1
© David Nečas (Yeti) 2009

Description: Imports Nanonics NAN data files.

Functions:
TypeNameInformation
filenanonicsNanonics files (.nan)

nanonics

0.1Yeti

Module: nanonis-0.9
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Nanonis SXM data files.

Functions:
TypeNameInformation
filenanonisNanonis SXM files (.sxm)

nanonis

0.9Yeti

Module: nanoscan-0.1
© David Nečas (Yeti) 2009

Description: Imports NanoScan XML files.

Functions:
TypeNameInformation
filenanoscanNanoScan XML files (.xml)

nanoscan

0.1Yeti

Module: nanoscope-0.26
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Imports Veeco (Digital Instruments) Nanoscope data files, version 3 or newer.

Functions:
TypeNameInformation
filenanoscopeNanoscope III files

nanoscope

0.26Yeti

Module: nanoscope-ii-0.2
© David Nečas (Yeti) & Petr Klapetek 2007

Description: Imports Digital Instruments Nanoscope II data files.

Functions:
TypeNameInformation
filenanoscope-iiNanoscope II files

nanoscope-ii

0.2Yeti

Module: nanotop-1.8
© Alexander Kovalev, Metal-Polymer Research Institute 2006

Description: Imports NANOTOP AFM files

Functions:
TypeNameInformation
filenanotopNanotop files (.spm)

nanotop

1.8Alexander Kovalev

Module: netcdf-0.4
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports network Common Data Form (netCDF) files.

Functions:
TypeNameInformation
filegsxmfileGSXM netCDF files (.nc)

netcdf

0.4Yeti

Module: nt-mdt-0.14
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Imports NT-MDT data files.

Functions:
TypeNameInformation
filent-mdtNT-MDT files (.mdt)

nt-mdt

0.14Yeti

Module: obj_synth-1.1
© David Nečas (Yeti) 2009

Description: Generates randomly patterned surfaces by placing objects.

Functions:
TypeNameInformation
procobj_synthSynthetic → Objects

obj_synth

1.1Yeti

Module: ols-0.8
© David Nečas (Yeti) & Petr Klapetek 2008

Description: Imports OLS data files.

Functions:
TypeNameInformation
fileolsOlympus LEXT OLS3000 (.ols)

ols

0.8Jan Hořák, Yeti

Module: omicron-0.7
© David Nečas (Yeti) & Petr Klapetek & Markus Pristovsek 2006

Description: Imports Omicron data files (two-part .par + .tf*, .tb*, .sf*, .sb*).

Functions:
TypeNameInformation
fileomicronOmicron files (.par + data)

omicron

0.7Yeti

Module: omicronflat-0.11
© François Bianco 2009

Description: Imports Omicron flat files.

Functions:
TypeNameInformation
fileomicronflatOmicron flat files (*.*flat)

omicronflat

0.11fbianco

Module: omicronmatrix-0.82
© Philipp Rahe 2008

Description: Omicron MATRIX (param.mtrx & data.mtrx)

Functions:
TypeNameInformation
fileomicronmatrixOmicron MATRIX (.mtrx & .mtrx)

omicronmatrix

0.82Philipp Rahe

Module: opdfile-0.6
© David Nečas (Yeti) 2008

Description: Imports Wyko OPD and ASC files.

Functions:
TypeNameInformation
fileopdfileWyko OPD files (.opd)
fileopdfile-ascWyko ASCII export files (.asc)

opdfile

0.6Yeti

Module: outliers-1.3
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Creates mask of outliers.

Functions:
TypeNameInformation
procoutliersCorrect Data → Mask of Outliers

outliers

1.3Petr Klapetek

Module: pathlevel-1.5
© David Nečas (Yeti) 2007

Description: Path level tool, performs row leveling along on user-set lines.

Functions:
TypeNameInformation
toolGwyToolPathLevelLevel rows using intersections with given lines

pathlevel

1.5Yeti

Module: pixmap-7.8
© David Nečas (Yeti) 2004-2009

Description: Renders data into pixmap images and imports data from pixmap images. It supports the following image formats for export: PNG, JPEG, TIFF, PPM, BMP, TARGA. Import support relies on GDK and thus may be installation-dependent.

Functions:
TypeNameInformation
filepngPortable Network Graphics (.png)
filegifGraphics Interchange Format (.gif)
fileicnsApple icon (.icns)
filejpeg2000JPEG 2000 (.jpx)
filetgaTARGA (.tga,.targa)
filejpegJPEG (.jpeg,.jpg)
filepnmPortable Pixmap (.ppm,.pnm)
filexpmX Pixmap (.xpm)
filerasSun raster image (.ras)
filetiffTIFF (.tiff,.tif)
fileqtifThe QTIF image format
filebmpWindows or OS2 Bitmap (.bmp)
filepcxPCX (.pcx)

pixmap

7.8Yeti

Module: pltfile-0.1
© David Nečas (Yeti) 2009

Description: Imports Nanosurf PLT files.

Functions:
TypeNameInformation
filepltfileNanosurf PLT files (.plt)

pltfile

0.1Yeti

Module: plugin-proxy-3.7
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Plug-in proxy is a module capable of querying, registering, and running external programs (plug-ins) on data pretending they are data processing or file loading/saving modules.

plugin-proxy

3.7Yeti

Module: pnifile-0.6
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Pacific Nanotechnology PNI data files.

Functions:
TypeNameInformation
filepnifilePNI files (.pni)

pnifile

0.6Yeti

Module: point-3.0
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of several points, displayed as crosses or inivisible.

Functions:
TypeNameInformation
layerGwyLayerPoint

point

3.0Yeti

Module: polydistort-1.4
© David Nečas (Yeti) & Petr Klapetek 2007

Description: Apllies polynomial distortion in the horizontal plane.

Functions:
TypeNameInformation
procpolydistortCorrect Data → Polynomial Distortion

polydistort

1.4Yeti

Module: polylevel-2.5
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts polynomial background.

Functions:
TypeNameInformation
procpolylevelLevel → Polynomial Background

polylevel

2.5Yeti

Module: polynom-2.2
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Polynomial line level tool, fits polynomials to X or Y profiles and subtracts them.

Functions:
TypeNameInformation
toolGwyToolPolynomLevel X or Y lines with polynomials

polynom

2.2Petr Klapetek

Module: presentationops-1.7
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Basic operations with presentation: extraction, removal.

Functions:
TypeNameInformation
procpresentation_removePresentation → Remove Presentation
procpresentation_extractPresentation → Extract Presentation
procpresentation_attachPresentation → Attach Presentation
procpresentation_logscalePresentation → Logscale

presentationops

1.7Yeti

Module: profile-2.12
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Profile tool, creates profile graphs from selected lines.

Functions:
TypeNameInformation
toolGwyToolProfileExtract profiles

profile

2.12Petr Klapetek

Module: psia-0.5
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports PSIA data files.

Functions:
TypeNameInformation
filepsiaPSIA data files (.tiff)

psia

0.5Yeti

Module: pt3file-0.1
© David Nečas (Yeti) 2009

Description: Imports SymPhoTime data files, version 2.0.

Functions:
TypeNameInformation
filept3filePicoHarp files (.pt3)

pt3file

0.1Yeti

Module: pygwy-0.1
© Jan Hořák 2007

Description: Pygwy, the Gwyddion Python wrapper.

pygwy

0.1Jan Hořák

Module: quesant-0.3
© David Nečas (Yeti) & Jan Hořák 2008

Description: Imports Quesant file format.

Functions:
TypeNameInformation
filequesantQuesant files (.afm)

quesant

0.3Jan Hořák, Yeti

Module: rawfile-2.7
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Imports raw data files, both ASCII and binary, according to user-specified format.

Functions:
TypeNameInformation
filerawfileRaw data files

rawfile

2.7Yeti

Module: rawgraph-0.2
© David Nečas (Yeti) 2009

Description: Imports simple text files as graph curves.

Functions:
TypeNameInformation
filerawgraphASCII graph curve files

rawgraph

0.2Yeti

Module: rawxyz-1.0
© David Nečas (Yeti) 2009

Description: Imports raw XYZ data files.

Functions:
TypeNameInformation
filerawxyzXYZ data files

rawxyz

1.0Yeti

Module: readvalue-2.10
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Pointer tool, reads value under pointer.

Functions:
TypeNameInformation
toolGwyToolReadValueRead value under mouse cursor

readvalue

2.10Yeti

Module: rectangle-2.8
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Layer allowing selection of rectangular areas.

Functions:
TypeNameInformation
layerGwyLayerRectangle

rectangle

2.8Yeti

Module: rhk-sm3-0.13
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports RHK Technology SM3 data files.

Functions:
TypeNameInformation
filerhk-sm3RHK SM3 files (.sm3)

rhk-sm3

0.13Yeti

Module: rhk-sm4-0.1
© David Nečas (Yeti) 2009

Description: Imports RHK Technology SM4 data files.

Functions:
TypeNameInformation
filerhk-sm4RHK SM4 files (.sm4)

rhk-sm4

0.1Yeti

Module: rhk-spm32-0.9
© David Nečas (Yeti) & Petr Klapetek, mod by Niv Levy 2007

Description: Imports RHK Technology SPM32 data files.

Functions:
TypeNameInformation
filerhk-spm32RHK SPM32 files (.sm2)

rhk-spm32

0.9Yeti

Module: rotate-1.10
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Rotates data by arbitrary angle.

Functions:
TypeNameInformation
procrotateBasic Operations → Rotate by Angle

rotate

1.10Yeti

Module: roughness-1.7
© Martin Hasoň & David Nečas (Yeti) 2006

Description: Calculate surface profile parameters.

Functions:
TypeNameInformation
toolGwyToolRoughnessCalculate roughness parameters

roughness

1.7Martin Hasoň, Yeti

Module: scale-1.6
© David Nečas (Yeti) & Petr Klapetek & Dirk Kähler 2003

Description: Scales data by arbitrary factor.

Functions:
TypeNameInformation
procscaleBasic Operations → Scale

scale

1.6Yeti

Module: scars-1.11
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Marks and/or removes scars (horizontal linear artefacts).

Functions:
TypeNameInformation
procscars_markCorrect Data → Mark Scars
procscars_removeCorrect Data → Remove Scars

scars

1.11Yeti

Module: sdfile-0.10
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Surfstand group SDF (Surface Data File) files.

Functions:
TypeNameInformation
filesdfile-binSurfstand SDF files, binary (.sdf)
filesdfile-txtSurfstand SDF files, text (.sdf)
filemicromapMicromap SDF files (.sdfa)

sdfile

0.10Yeti

Module: seiko-0.5
© David Nečas (Yeti) & Markus Pristovsek 2006

Description: Imports Seiko XQB, XQD and XQT files.

Functions:
TypeNameInformation
fileseikoSeiko files (.xqb, .xqd, .xqt)

seiko

0.5Yeti

Module: selectionmanager-1.0
© David Nečas (Yeti) 2009

Description: Grain removal tool, removes continuous parts of mask and/or underlying data.

Functions:
TypeNameInformation
toolGwyToolSelectionManagerDisplay and copy selections

selectionmanager

1.0Yeti

Module: sensofar-0.3
© David Nečas (Yeti) & Jan Hořák 2008

Description: Imports Sensofar PLu file format, version 2000 or newer.

Functions:
TypeNameInformation
filesensofarSensofar PLu files (.plu)

sensofar

0.3Jan Hořák, Yeti

Module: sensolytics-0.1
© David Nečas (Yeti) 2009

Description: Imports Sensolytics text files.

Functions:
TypeNameInformation
filesensolyticsSensolytics text files (.dat)

sensolytics

0.1Yeti

Module: sfunctions-2.7
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Statistical function tool, calculates one-dimensional statistical functions (height distribution, correlations, PSDF, Minkowski functionals) of selected part of data.

Functions:
TypeNameInformation
toolGwyToolSFunctionsCalculate 1D statistical functions

sfunctions

2.7Petr Klapetek

Module: shade-2.4
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Creates a shaded presentation of data.

Functions:
TypeNameInformation
procshadePresentation → Shading

shade

2.4Petr Klapetek

Module: shimadzu-0.3
© David Nečas (Yeti) 2007

Description: Imports Shimadzu SPM data files, version 2.

Functions:
TypeNameInformation
fileshimadzuShimadzu files

shimadzu

0.3Yeti

Module: sicmfile-1.2
© Matthew Caldwell 2007-2010

Description: Imports IonScope SICM data files.

Functions:
TypeNameInformation
filesicmIonScope SICM files (.img)

sicmfile

1.2Matthew Caldwell

Module: sis-0.15
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Imports SIS (Surface Imaging Systems) data files.

Functions:
TypeNameInformation
filesisSIS files (.sis)

sis

0.15Yeti

Module: slope_dist-1.12
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Calculates one- or two-dimensional distribution of slopes or graph of their angular distribution.

Functions:
TypeNameInformation
procslope_distStatistics → Slope Distribution

slope_dist

1.12Yeti

Module: spectro-0.2
© Owain Davies, David Nečas (Yeti) & Petr Klapetek 2006

Description: Point Spectrum, extracts point spectra to a graph.

Functions:
TypeNameInformation
toolGwyToolSpectroExtract and view point spectroscopy data

spectro

0.2Owain Davies

Module: sphere-revolve-1.5
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Subtracts background by arc or sphere revolution.

Functions:
TypeNameInformation
procarc_revolveLevel → Revolve Arc

sphere-revolve

1.5Yeti

Module: spip-asc-0.2
© David Nečas (Yeti) 2009

Description: Imports SPIP ASC files.

Functions:
TypeNameInformation
filespip-ascSPIP ASCII files (.asc)

spip-asc

0.2Yeti

Module: spml-0.1.4
© Jan Hořák 2006

Description: Loads SPML (Scanning Probe Microscopy Markup Language) data files.

Functions:
TypeNameInformation
filespmlSPML files (.xml)

spml

0.1.4Jan Hořák

Module: spmlab-0.10
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Thermicroscopes SpmLab R3 to R7 data files.

Functions:
TypeNameInformation
filespmlabThermicroscopes SpmLab files

spmlab

0.10Yeti

Module: spmlabf-0.3
© David Nečas (Yeti) 2008

Description: Imports SPMLab floating-point files.

Functions:
TypeNameInformation
filespmlabfSPMLab floating-point files (.flt)

spmlabf

0.3Yeti

Module: spotremove-2.4
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Spot removal tool, interpolates small parts of data (displayed on a zoomed view) using selected algorithm.

Functions:
TypeNameInformation
toolGwyToolSpotRemoverInterpolate small defects, manually selected

spotremove

2.4Yeti

Module: stats-2.11
© David Nečas (Yeti) & Petr Klapetek 2003

Description: Statistics tool.

Functions:
TypeNameInformation
toolGwyToolStatsStatistical quantities

stats

2.11Petr Klapetek

Module: stmprg-0.10
© Rok Zitko & David Nečas (Yeti) 2004

Description: Imports Omicron STMPRG data files (tp ta).

Functions:
TypeNameInformation
filestmprgOmicron STMPRG files (tp ta)

stmprg

0.10Rok Zitko, Yeti

Module: stpfile-0.5.1
© David Nečas (Yeti), Petr Klapetek, Chris Anderson 2006

Description: Imports Molecular Imaging STP data files.

Functions:
TypeNameInformation
filestpfileSTP files (.stp)

stpfile

0.5.1Yeti

Module: surffile-0.9
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Imports Surf data files.

Functions:
TypeNameInformation
filesurffileSurf files (.sur)

surffile

0.9Petr Klapetek

Module: tilt-1.0
© David Nečas (Yeti) 2008

Description: Tilts image by specified amount.

Functions:
TypeNameInformation
proctiltBasic Operations → Tilt

tilt

1.0Yeti

Module: tip_blind-1.4
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Blind estimation of SPM tip using Villarubia's algorithm.

Functions:
TypeNameInformation
proctip_blindTip → Blind Estimation

tip_blind

1.4Petr Klapetek

Module: tip_model-1.5
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Models SPM tip.

Functions:
TypeNameInformation
proctip_modelTip → Model Tip

tip_model

1.5Petr Klapetek

Module: tipops-1.1
© David Nečas (Yeti) & Petr Klapetek 2006

Description: Tip operations: dilation (convolution), erosion (reconstruction) and certainty map.

Functions:
TypeNameInformation
proctip_dilationTip → Dilation
proctip_reconstructionTip → Surface Reconstruction
proctip_mapTip → Certainty Map

tipops

1.1Petr Klapetek, Yeti

Module: unisoku-0.7
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Unisoku data files (two-part .hdr + .dat).

Functions:
TypeNameInformation
fileunisokuUnisoku files (.hdr + .dat)

unisoku

0.7Yeti

Module: unrotate-2.4
© David Nečas (Yeti) & Petr Klapetek 2004

Description: Rotates data to make characteristic directions parallel with x or y axis.

Functions:
TypeNameInformation
procunrotateCorrect Data → Unrotate

unrotate

2.4Yeti

Module: witfile-0.6
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports WITec WIT data files.

Functions:
TypeNameInformation
filewitfileWITec files (.wit)

witfile

0.6Yeti

Module: wsxmfile-0.10
© David Nečas (Yeti) & Petr Klapetek 2005

Description: Imports Nanotec WSxM data files.

Functions:
TypeNameInformation
filewsxmfileWSXM files (.tom)

wsxmfile

0.10Yeti

Instructions

Point mouse cursor over a table row, a detailed module description will pop up. Please note this feature requires a modern WWW browser with decent CSS support – e.g., Mozilla, Opera or Konqueror.

If nothing pops up, the table looks like confusing information pell-mell, or you simply don't like it this way, you can use a plain expanded version of the table.

1.5 (yeti, 2007-09-27 18:21:58)
© David Nečas and Petr Klapetek

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